BRASS
Description
BRASS is a structural variant calling pipeline used in GDC whole genome sequencing (WGS) harmonization.
Overview
Structural variant calling is performed with BRASS using tumor and normal alignments and generates Structural Rearrangement data.
Input
- Tumor BAM - WGS
- Normal BAM - WGS
Output
- BEDPE (Data Type: Structural Rearrangement)
- VCF (Data Type: Structural Rearrangement)
References
External Links
Categories: Workflow Type