Appendix A: Available Fields

The GDC API's search and retrieval endpoints provide access to fields that correspond to properties defined in the GDC Data Dictionary. This appendix contains a list of fields available at each endpoint, and a list of field groups accessible via the expand parameter.

Field Listing by Endpoint

Project Fields

Field Name
dbgap_accession_number
disease_type
name
primary_site
project_id
released
state
program.dbgap_accession_number
program.name
program.program_id
summary.case_count
summary.file_count
summary.file_size
summary.data_categories.case_count
summary.data_categories.data_category
summary.data_categories.file_count
summary.experimental_strategies.case_count
summary.experimental_strategies.experimental_strategy
summary.experimental_strategies.file_count

Case Fields

Field Name
aliquot_ids
analyte_ids
case_id
created_datetime
days_to_index
portion_ids
sample_ids
slide_ids
state
submitter_aliquot_ids
submitter_analyte_ids
submitter_id
submitter_portion_ids
submitter_sample_ids
submitter_slide_ids
updated_datetime
annotations.annotation_id
annotations.case_id
annotations.case_submitter_id
annotations.category
annotations.classification
annotations.created_datetime
annotations.creator
annotations.entity_id
annotations.entity_submitter_id
annotations.entity_type
annotations.legacy_created_datetime
annotations.legacy_updated_datetime
annotations.notes
annotations.state
annotations.status
annotations.submitter_id
annotations.updated_datetime
demographic.created_datetime
demographic.demographic_id
demographic.ethnicity
demographic.gender
demographic.race
demographic.state
demographic.submitter_id
demographic.updated_datetime
demographic.year_of_birth
demographic.year_of_death
diagnoses.age_at_diagnosis
diagnoses.classification_of_tumor
diagnoses.created_datetime
diagnoses.days_to_birth
diagnoses.days_to_death
diagnoses.days_to_last_follow_up
diagnoses.days_to_last_known_disease_status
diagnoses.days_to_recurrence
diagnoses.diagnosis_id
diagnoses.last_known_disease_status
diagnoses.morphology
diagnoses.primary_diagnosis
diagnoses.prior_malignancy
diagnoses.progression_or_recurrence
diagnoses.site_of_resection_or_biopsy
diagnoses.state
diagnoses.submitter_id
diagnoses.tissue_or_organ_of_origin
diagnoses.tumor_grade
diagnoses.tumor_stage
diagnoses.updated_datetime
diagnoses.vital_status
diagnoses.treatments.created_datetime
diagnoses.treatments.days_to_treatment
diagnoses.treatments.state
diagnoses.treatments.submitter_id
diagnoses.treatments.therapeutic_agents
diagnoses.treatments.treatment_id
diagnoses.treatments.treatment_intent_type
diagnoses.treatments.treatment_or_therapy
diagnoses.treatments.updated_datetime
exposures.alcohol_history
exposures.alcohol_intensity
exposures.bmi
exposures.cigarettes_per_day
exposures.created_datetime
exposures.exposure_id
exposures.height
exposures.state
exposures.submitter_id
exposures.updated_datetime
exposures.weight
exposures.years_smoked
family_histories.created_datetime
family_histories.family_history_id
family_histories.relationship_age_at_diagnosis
family_histories.relationship_gender
family_histories.relationship_primary_diagnosis
family_histories.relationship_type
family_histories.relative_with_cancer_history
family_histories.state
family_histories.submitter_id
family_histories.updated_datetime
files.access
files.acl
files.created_datetime
files.data_category
files.data_format
files.data_type
files.error_type
files.experimental_strategy
files.file_id
files.file_name
files.file_size
files.file_state
files.md5sum
files.origin
files.platform
files.revision
files.state
files.state_comment
files.submitter_id
files.tags
files.type
files.updated_datetime
files.analysis.analysis_id
files.analysis.analysis_type
files.analysis.created_datetime
files.analysis.state
files.analysis.submitter_id
files.analysis.updated_datetime
files.analysis.workflow_end_datetime
files.analysis.workflow_link
files.analysis.workflow_start_datetime
files.analysis.workflow_type
files.analysis.workflow_version
files.analysis.input_files.access
files.analysis.input_files.created_datetime
files.analysis.input_files.data_category
files.analysis.input_files.data_format
files.analysis.input_files.data_type
files.analysis.input_files.error_type
files.analysis.input_files.experimental_strategy
files.analysis.input_files.file_id
files.analysis.input_files.file_name
files.analysis.input_files.file_size
files.analysis.input_files.file_state
files.analysis.input_files.md5sum
files.analysis.input_files.platform
files.analysis.input_files.revision
files.analysis.input_files.state
files.analysis.input_files.state_comment
files.analysis.input_files.submitter_id
files.analysis.input_files.updated_datetime
files.analysis.metadata.read_groups.adapter_name
files.analysis.metadata.read_groups.adapter_sequence
files.analysis.metadata.read_groups.base_caller_name
files.analysis.metadata.read_groups.base_caller_version
files.analysis.metadata.read_groups.created_datetime
files.analysis.metadata.read_groups.experiment_name
files.analysis.metadata.read_groups.flow_cell_barcode
files.analysis.metadata.read_groups.includes_spike_ins
files.analysis.metadata.read_groups.instrument_model
files.analysis.metadata.read_groups.is_paired_end
files.analysis.metadata.read_groups.library_name
files.analysis.metadata.read_groups.library_preparation_kit_catalog_number
files.analysis.metadata.read_groups.library_preparation_kit_name
files.analysis.metadata.read_groups.library_preparation_kit_vendor
files.analysis.metadata.read_groups.library_preparation_kit_version
files.analysis.metadata.read_groups.library_selection
files.analysis.metadata.read_groups.library_strand
files.analysis.metadata.read_groups.library_strategy
files.analysis.metadata.read_groups.platform
files.analysis.metadata.read_groups.read_group_id
files.analysis.metadata.read_groups.read_group_name
files.analysis.metadata.read_groups.read_length
files.analysis.metadata.read_groups.RIN
files.analysis.metadata.read_groups.sequencing_center
files.analysis.metadata.read_groups.sequencing_date
files.analysis.metadata.read_groups.size_selection_range
files.analysis.metadata.read_groups.spike_ins_concentration
files.analysis.metadata.read_groups.spike_ins_fasta
files.analysis.metadata.read_groups.state
files.analysis.metadata.read_groups.submitter_id
files.analysis.metadata.read_groups.target_capture_kit_catalog_number
files.analysis.metadata.read_groups.target_capture_kit_name
files.analysis.metadata.read_groups.target_capture_kit_target_region
files.analysis.metadata.read_groups.target_capture_kit_vendor
files.analysis.metadata.read_groups.target_capture_kit_version
files.analysis.metadata.read_groups.to_trim_adapter_sequence
files.analysis.metadata.read_groups.updated_datetime
files.analysis.metadata.read_groups.read_group_qcs.adapter_content
files.analysis.metadata.read_groups.read_group_qcs.basic_statistics
files.analysis.metadata.read_groups.read_group_qcs.created_datetime
files.analysis.metadata.read_groups.read_group_qcs.encoding
files.analysis.metadata.read_groups.read_group_qcs.fastq_name
files.analysis.metadata.read_groups.read_group_qcs.kmer_content
files.analysis.metadata.read_groups.read_group_qcs.overrepresented_sequences
files.analysis.metadata.read_groups.read_group_qcs.per_base_n_content
files.analysis.metadata.read_groups.read_group_qcs.per_base_sequence_content
files.analysis.metadata.read_groups.read_group_qcs.per_base_sequence_quality
files.analysis.metadata.read_groups.read_group_qcs.per_sequence_gc_content
files.analysis.metadata.read_groups.read_group_qcs.per_sequence_quality_score
files.analysis.metadata.read_groups.read_group_qcs.per_tile_sequence_quality
files.analysis.metadata.read_groups.read_group_qcs.percent_gc_content
files.analysis.metadata.read_groups.read_group_qcs.read_group_qc_id
files.analysis.metadata.read_groups.read_group_qcs.sequence_duplication_levels
files.analysis.metadata.read_groups.read_group_qcs.sequence_length_distribution
files.analysis.metadata.read_groups.read_group_qcs.state
files.analysis.metadata.read_groups.read_group_qcs.submitter_id
files.analysis.metadata.read_groups.read_group_qcs.total_sequences
files.analysis.metadata.read_groups.read_group_qcs.updated_datetime
files.analysis.metadata.read_groups.read_group_qcs.workflow_end_datetime
files.analysis.metadata.read_groups.read_group_qcs.workflow_link
files.analysis.metadata.read_groups.read_group_qcs.workflow_start_datetime
files.analysis.metadata.read_groups.read_group_qcs.workflow_type
files.analysis.metadata.read_groups.read_group_qcs.workflow_version
files.archive.archive_id
files.archive.created_datetime
files.archive.data_category
files.archive.data_format
files.archive.data_type
files.archive.error_type
files.archive.file_name
files.archive.file_size
files.archive.file_state
files.archive.md5sum
files.archive.revision
files.archive.state
files.archive.state_comment
files.archive.submitter_id
files.archive.updated_datetime
files.cases.aliquot_ids
files.cases.analyte_ids
files.cases.case_id
files.cases.created_datetime
files.cases.days_to_index
files.cases.portion_ids
files.cases.sample_ids
files.cases.slide_ids
files.cases.state
files.cases.submitter_aliquot_ids
files.cases.submitter_analyte_ids
files.cases.submitter_id
files.cases.submitter_portion_ids
files.cases.submitter_sample_ids
files.cases.submitter_slide_ids
files.cases.updated_datetime
files.cases.annotations.annotation_id
files.cases.annotations.case_id
files.cases.annotations.case_submitter_id
files.cases.annotations.category
files.cases.annotations.classification
files.cases.annotations.created_datetime
files.cases.annotations.creator
files.cases.annotations.entity_id
files.cases.annotations.entity_submitter_id
files.cases.annotations.entity_type
files.cases.annotations.legacy_created_datetime
files.cases.annotations.legacy_updated_datetime
files.cases.annotations.notes
files.cases.annotations.state
files.cases.annotations.status
files.cases.annotations.submitter_id
files.cases.annotations.updated_datetime
files.cases.demographic.created_datetime
files.cases.demographic.demographic_id
files.cases.demographic.ethnicity
files.cases.demographic.gender
files.cases.demographic.race
files.cases.demographic.state
files.cases.demographic.submitter_id
files.cases.demographic.updated_datetime
files.cases.demographic.year_of_birth
files.cases.demographic.year_of_death
files.cases.diagnoses.age_at_diagnosis
files.cases.diagnoses.classification_of_tumor
files.cases.diagnoses.created_datetime
files.cases.diagnoses.days_to_birth
files.cases.diagnoses.days_to_death
files.cases.diagnoses.days_to_last_follow_up
files.cases.diagnoses.days_to_last_known_disease_status
files.cases.diagnoses.days_to_recurrence
files.cases.diagnoses.diagnosis_id
files.cases.diagnoses.last_known_disease_status
files.cases.diagnoses.morphology
files.cases.diagnoses.primary_diagnosis
files.cases.diagnoses.prior_malignancy
files.cases.diagnoses.progression_or_recurrence
files.cases.diagnoses.site_of_resection_or_biopsy
files.cases.diagnoses.state
files.cases.diagnoses.submitter_id
files.cases.diagnoses.tissue_or_organ_of_origin
files.cases.diagnoses.tumor_grade
files.cases.diagnoses.tumor_stage
files.cases.diagnoses.updated_datetime
files.cases.diagnoses.vital_status
files.cases.diagnoses.treatments.created_datetime
files.cases.diagnoses.treatments.days_to_treatment
files.cases.diagnoses.treatments.state
files.cases.diagnoses.treatments.submitter_id
files.cases.diagnoses.treatments.therapeutic_agents
files.cases.diagnoses.treatments.treatment_id
files.cases.diagnoses.treatments.treatment_intent_type
files.cases.diagnoses.treatments.treatment_or_therapy
files.cases.diagnoses.treatments.updated_datetime
files.cases.exposures.alcohol_history
files.cases.exposures.alcohol_intensity
files.cases.exposures.bmi
files.cases.exposures.cigarettes_per_day
files.cases.exposures.created_datetime
files.cases.exposures.exposure_id
files.cases.exposures.height
files.cases.exposures.state
files.cases.exposures.submitter_id
files.cases.exposures.updated_datetime
files.cases.exposures.weight
files.cases.exposures.years_smoked
files.cases.family_histories.created_datetime
files.cases.family_histories.family_history_id
files.cases.family_histories.relationship_age_at_diagnosis
files.cases.family_histories.relationship_gender
files.cases.family_histories.relationship_primary_diagnosis
files.cases.family_histories.relationship_type
files.cases.family_histories.relative_with_cancer_history
files.cases.family_histories.state
files.cases.family_histories.submitter_id
files.cases.family_histories.updated_datetime
files.cases.files.created_datetime
files.cases.files.error_type
files.cases.files.file_id
files.cases.files.file_name
files.cases.files.file_size
files.cases.files.file_state
files.cases.files.md5sum
files.cases.files.state
files.cases.files.state_comment
files.cases.files.submitter_id
files.cases.files.updated_datetime
files.cases.project.dbgap_accession_number
files.cases.project.disease_type
files.cases.project.name
files.cases.project.primary_site
files.cases.project.project_id
files.cases.project.released
files.cases.project.state
files.cases.project.program.dbgap_accession_number
files.cases.project.program.name
files.cases.project.program.program_id
files.cases.samples.composition
files.cases.samples.created_datetime
files.cases.samples.current_weight
files.cases.samples.days_to_collection
files.cases.samples.days_to_sample_procurement
files.cases.samples.freezing_method
files.cases.samples.initial_weight
files.cases.samples.intermediate_dimension
files.cases.samples.is_ffpe
files.cases.samples.longest_dimension
files.cases.samples.oct_embedded
files.cases.samples.pathology_report_uuid
files.cases.samples.preservation_method
files.cases.samples.sample_id
files.cases.samples.sample_type
files.cases.samples.sample_type_id
files.cases.samples.shortest_dimension
files.cases.samples.state
files.cases.samples.submitter_id
files.cases.samples.time_between_clamping_and_freezing
files.cases.samples.time_between_excision_and_freezing
files.cases.samples.tissue_type
files.cases.samples.tumor_code
files.cases.samples.tumor_code_id
files.cases.samples.tumor_descriptor
files.cases.samples.updated_datetime
files.cases.samples.annotations.annotation_id
files.cases.samples.annotations.case_id
files.cases.samples.annotations.case_submitter_id
files.cases.samples.annotations.category
files.cases.samples.annotations.classification
files.cases.samples.annotations.created_datetime
files.cases.samples.annotations.creator
files.cases.samples.annotations.entity_id
files.cases.samples.annotations.entity_submitter_id
files.cases.samples.annotations.entity_type
files.cases.samples.annotations.legacy_created_datetime
files.cases.samples.annotations.legacy_updated_datetime
files.cases.samples.annotations.notes
files.cases.samples.annotations.state
files.cases.samples.annotations.status
files.cases.samples.annotations.submitter_id
files.cases.samples.annotations.updated_datetime
files.cases.samples.portions.created_datetime
files.cases.samples.portions.creation_datetime
files.cases.samples.portions.is_ffpe
files.cases.samples.portions.portion_id
files.cases.samples.portions.portion_number
files.cases.samples.portions.state
files.cases.samples.portions.submitter_id
files.cases.samples.portions.updated_datetime
files.cases.samples.portions.weight
files.cases.samples.portions.analytes.a260_a280_ratio
files.cases.samples.portions.analytes.amount
files.cases.samples.portions.analytes.analyte_id
files.cases.samples.portions.analytes.analyte_type
files.cases.samples.portions.analytes.analyte_type_id
files.cases.samples.portions.analytes.concentration
files.cases.samples.portions.analytes.created_datetime
files.cases.samples.portions.analytes.spectrophotometer_method
files.cases.samples.portions.analytes.state
files.cases.samples.portions.analytes.submitter_id
files.cases.samples.portions.analytes.updated_datetime
files.cases.samples.portions.analytes.well_number
files.cases.samples.portions.analytes.aliquots.aliquot_id
files.cases.samples.portions.analytes.aliquots.amount
files.cases.samples.portions.analytes.aliquots.analyte_type
files.cases.samples.portions.analytes.aliquots.analyte_type_id
files.cases.samples.portions.analytes.aliquots.concentration
files.cases.samples.portions.analytes.aliquots.created_datetime
files.cases.samples.portions.analytes.aliquots.source_center
files.cases.samples.portions.analytes.aliquots.state
files.cases.samples.portions.analytes.aliquots.submitter_id
files.cases.samples.portions.analytes.aliquots.updated_datetime
files.cases.samples.portions.analytes.aliquots.annotations.annotation_id
files.cases.samples.portions.analytes.aliquots.annotations.case_id
files.cases.samples.portions.analytes.aliquots.annotations.case_submitter_id
files.cases.samples.portions.analytes.aliquots.annotations.category
files.cases.samples.portions.analytes.aliquots.annotations.classification
files.cases.samples.portions.analytes.aliquots.annotations.created_datetime
files.cases.samples.portions.analytes.aliquots.annotations.creator
files.cases.samples.portions.analytes.aliquots.annotations.entity_id
files.cases.samples.portions.analytes.aliquots.annotations.entity_submitter_id
files.cases.samples.portions.analytes.aliquots.annotations.entity_type
files.cases.samples.portions.analytes.aliquots.annotations.legacy_created_datetime
files.cases.samples.portions.analytes.aliquots.annotations.legacy_updated_datetime
files.cases.samples.portions.analytes.aliquots.annotations.notes
files.cases.samples.portions.analytes.aliquots.annotations.state
files.cases.samples.portions.analytes.aliquots.annotations.status
files.cases.samples.portions.analytes.aliquots.annotations.submitter_id
files.cases.samples.portions.analytes.aliquots.annotations.updated_datetime
files.cases.samples.portions.analytes.aliquots.center.center_id
files.cases.samples.portions.analytes.aliquots.center.center_type
files.cases.samples.portions.analytes.aliquots.center.code
files.cases.samples.portions.analytes.aliquots.center.name
files.cases.samples.portions.analytes.aliquots.center.namespace
files.cases.samples.portions.analytes.aliquots.center.short_name
files.cases.samples.portions.analytes.annotations.annotation_id
files.cases.samples.portions.analytes.annotations.case_id
files.cases.samples.portions.analytes.annotations.case_submitter_id
files.cases.samples.portions.analytes.annotations.category
files.cases.samples.portions.analytes.annotations.classification
files.cases.samples.portions.analytes.annotations.created_datetime
files.cases.samples.portions.analytes.annotations.creator
files.cases.samples.portions.analytes.annotations.entity_id
files.cases.samples.portions.analytes.annotations.entity_submitter_id
files.cases.samples.portions.analytes.annotations.entity_type
files.cases.samples.portions.analytes.annotations.legacy_created_datetime
files.cases.samples.portions.analytes.annotations.legacy_updated_datetime
files.cases.samples.portions.analytes.annotations.notes
files.cases.samples.portions.analytes.annotations.state
files.cases.samples.portions.analytes.annotations.status
files.cases.samples.portions.analytes.annotations.submitter_id
files.cases.samples.portions.analytes.annotations.updated_datetime
files.cases.samples.portions.annotations.annotation_id
files.cases.samples.portions.annotations.case_id
files.cases.samples.portions.annotations.case_submitter_id
files.cases.samples.portions.annotations.category
files.cases.samples.portions.annotations.classification
files.cases.samples.portions.annotations.created_datetime
files.cases.samples.portions.annotations.creator
files.cases.samples.portions.annotations.entity_id
files.cases.samples.portions.annotations.entity_submitter_id
files.cases.samples.portions.annotations.entity_type
files.cases.samples.portions.annotations.legacy_created_datetime
files.cases.samples.portions.annotations.legacy_updated_datetime
files.cases.samples.portions.annotations.notes
files.cases.samples.portions.annotations.state
files.cases.samples.portions.annotations.status
files.cases.samples.portions.annotations.submitter_id
files.cases.samples.portions.annotations.updated_datetime
files.cases.samples.portions.center.center_id
files.cases.samples.portions.center.center_type
files.cases.samples.portions.center.code
files.cases.samples.portions.center.name
files.cases.samples.portions.center.namespace
files.cases.samples.portions.center.short_name
files.cases.samples.portions.slides.created_datetime
files.cases.samples.portions.slides.number_proliferating_cells
files.cases.samples.portions.slides.percent_eosinophil_infiltration
files.cases.samples.portions.slides.percent_granulocyte_infiltration
files.cases.samples.portions.slides.percent_inflam_infiltration
files.cases.samples.portions.slides.percent_lymphocyte_infiltration
files.cases.samples.portions.slides.percent_monocyte_infiltration
files.cases.samples.portions.slides.percent_necrosis
files.cases.samples.portions.slides.percent_neutrophil_infiltration
files.cases.samples.portions.slides.percent_normal_cells
files.cases.samples.portions.slides.percent_stromal_cells
files.cases.samples.portions.slides.percent_tumor_cells
files.cases.samples.portions.slides.percent_tumor_nuclei
files.cases.samples.portions.slides.section_location
files.cases.samples.portions.slides.slide_id
files.cases.samples.portions.slides.state
files.cases.samples.portions.slides.submitter_id
files.cases.samples.portions.slides.updated_datetime
files.cases.samples.portions.slides.annotations.annotation_id
files.cases.samples.portions.slides.annotations.case_id
files.cases.samples.portions.slides.annotations.case_submitter_id
files.cases.samples.portions.slides.annotations.category
files.cases.samples.portions.slides.annotations.classification
files.cases.samples.portions.slides.annotations.created_datetime
files.cases.samples.portions.slides.annotations.creator
files.cases.samples.portions.slides.annotations.entity_id
files.cases.samples.portions.slides.annotations.entity_submitter_id
files.cases.samples.portions.slides.annotations.entity_type
files.cases.samples.portions.slides.annotations.legacy_created_datetime
files.cases.samples.portions.slides.annotations.legacy_updated_datetime
files.cases.samples.portions.slides.annotations.notes
files.cases.samples.portions.slides.annotations.state
files.cases.samples.portions.slides.annotations.status
files.cases.samples.portions.slides.annotations.submitter_id
files.cases.samples.portions.slides.annotations.updated_datetime
files.cases.summary.file_count
files.cases.summary.file_size
files.cases.summary.data_categories.data_category
files.cases.summary.data_categories.file_count
files.cases.summary.experimental_strategies.experimental_strategy
files.cases.summary.experimental_strategies.file_count
files.cases.tissue_source_site.bcr_id
files.cases.tissue_source_site.code
files.cases.tissue_source_site.name
files.cases.tissue_source_site.project
files.cases.tissue_source_site.tissue_source_site_id
files.center.center_id
files.center.center_type
files.center.code
files.center.name
files.center.namespace
files.center.short_name
files.downstream_analyses.analysis_id
files.downstream_analyses.analysis_type
files.downstream_analyses.created_datetime
files.downstream_analyses.state
files.downstream_analyses.submitter_id
files.downstream_analyses.updated_datetime
files.downstream_analyses.workflow_end_datetime
files.downstream_analyses.workflow_link
files.downstream_analyses.workflow_start_datetime
files.downstream_analyses.workflow_type
files.downstream_analyses.workflow_version
files.downstream_analyses.output_files.access
files.downstream_analyses.output_files.created_datetime
files.downstream_analyses.output_files.data_category
files.downstream_analyses.output_files.data_format
files.downstream_analyses.output_files.data_type
files.downstream_analyses.output_files.error_type
files.downstream_analyses.output_files.experimental_strategy
files.downstream_analyses.output_files.file_id
files.downstream_analyses.output_files.file_name
files.downstream_analyses.output_files.file_size
files.downstream_analyses.output_files.file_state
files.downstream_analyses.output_files.md5sum
files.downstream_analyses.output_files.platform
files.downstream_analyses.output_files.revision
files.downstream_analyses.output_files.state
files.downstream_analyses.output_files.state_comment
files.downstream_analyses.output_files.submitter_id
files.downstream_analyses.output_files.updated_datetime
files.index_files.access
files.index_files.created_datetime
files.index_files.data_category
files.index_files.data_format
files.index_files.data_type
files.index_files.error_type
files.index_files.experimental_strategy
files.index_files.file_id
files.index_files.file_name
files.index_files.file_size
files.index_files.file_state
files.index_files.md5sum
files.index_files.platform
files.index_files.revision
files.index_files.state
files.index_files.state_comment
files.index_files.submitter_id
files.index_files.updated_datetime
files.metadata_files.access
files.metadata_files.created_datetime
files.metadata_files.data_category
files.metadata_files.data_format
files.metadata_files.data_type
files.metadata_files.error_type
files.metadata_files.file_id
files.metadata_files.file_name
files.metadata_files.file_size
files.metadata_files.file_state
files.metadata_files.md5sum
files.metadata_files.state
files.metadata_files.state_comment
files.metadata_files.submitter_id
files.metadata_files.type
files.metadata_files.updated_datetime
project.dbgap_accession_number
project.disease_type
project.name
project.primary_site
project.project_id
project.released
project.state
project.program.dbgap_accession_number
project.program.name
project.program.program_id
samples.composition
samples.created_datetime
samples.current_weight
samples.days_to_collection
samples.days_to_sample_procurement
samples.freezing_method
samples.initial_weight
samples.intermediate_dimension
samples.is_ffpe
samples.longest_dimension
samples.oct_embedded
samples.pathology_report_uuid
samples.preservation_method
samples.sample_id
samples.sample_type
samples.sample_type_id
samples.shortest_dimension
samples.state
samples.submitter_id
samples.time_between_clamping_and_freezing
samples.time_between_excision_and_freezing
samples.tissue_type
samples.tumor_code
samples.tumor_code_id
samples.tumor_descriptor
samples.updated_datetime
samples.annotations.annotation_id
samples.annotations.case_id
samples.annotations.case_submitter_id
samples.annotations.category
samples.annotations.classification
samples.annotations.created_datetime
samples.annotations.creator
samples.annotations.entity_id
samples.annotations.entity_submitter_id
samples.annotations.entity_type
samples.annotations.legacy_creat
samples.annotations.legacy_updated_datetime
samples.annotations.notes
samples.annotations.state
samples.annotations.status
samples.annotations.submitter_id
samples.annotations.updated_datetime
samples.portions.created_datetime
samples.portions.creation_datetime
samples.portions.is_ffpe
samples.portions.portion_id
samples.portions.portion_number
samples.portions.state
samples.portions.submitter_id
samples.portions.updated_datetime
samples.portions.weight
samples.portions.analytes.a260_a280_ratio
samples.portions.analytes.amount
samples.portions.analytes.analyte_id
samples.portions.analytes.analyte_type
samples.portions.analytes.analyte_type_id
samples.portions.analytes.concentration
samples.portions.analytes.created_datetime
samples.portions.analytes.spectrophotometer_method
samples.portions.analytes.state
samples.portions.analytes.submitter_id
samples.portions.analytes.updated_datetime
samples.portions.analytes.well_number
samples.portions.analytes.aliquots.aliquot_id
samples.portions.analytes.aliquots.amount
samples.portions.analytes.aliquots.analyte_type
samples.portions.analytes.aliquots.analyte_type_id
samples.portions.analytes.aliquots.concentration
samples.portions.analytes.aliquots.created_datetime
samples.portions.analytes.aliquots.source_center
samples.portions.analytes.aliquots.state
samples.portions.analytes.aliquots.submitter_id
samples.portions.analytes.aliquots.updated_datetime
samples.portions.analytes.aliquots.annotations.annotation_id
samples.portions.analytes.aliquots.annotations.case_id
samples.portions.analytes.aliquots.annotations.case_submitter_id
samples.portions.analytes.aliquots.annotations.category
samples.portions.analytes.aliquots.annotations.classification
samples.portions.analytes.aliquots.annotations.created_datetime
samples.portions.analytes.aliquots.annotations.creator
samples.portions.analytes.aliquots.annotations.entity_id
samples.portions.analytes.aliquots.annotations.entity_submitter_id
samples.portions.analytes.aliquots.annotations.entity_type
samples.portions.analytes.aliquots.annotations.legacy_created_datetime
samples.portions.analytes.aliquots.annotations.legacy_updated_datetime
samples.portions.analytes.aliquots.annotations.notes
samples.portions.analytes.aliquots.annotations.state
samples.portions.analytes.aliquots.annotations.status
samples.portions.analytes.aliquots.annotations.submitter_id
samples.portions.analytes.aliquots.annotations.updated_datetime
samples.portions.analytes.aliquots.center.center_id
samples.portions.analytes.aliquots.center.center_type
samples.portions.analytes.aliquots.center.code
samples.portions.analytes.aliquots.center.name
samples.portions.analytes.aliquots.center.namespace
samples.portions.analytes.aliquots.center.short_name
samples.portions.analytes.annotations.annotation_id
samples.portions.analytes.annotations.case_id
samples.portions.analytes.annotations.case_submitter_id
samples.portions.analytes.annotations.category
samples.portions.analytes.annotations.classification
samples.portions.analytes.annotations.created_datetime
samples.portions.analytes.annotations.creator
samples.portions.analytes.annotations.entity_id
samples.portions.analytes.annotations.entity_submitter_id
samples.portions.analytes.annotations.entity_type
samples.portions.analytes.annotations.legacy_created_datetime
samples.portions.analytes.annotations.legacy_updated_datetime
samples.portions.analytes.annotations.notes
samples.portions.analytes.annotations.state
samples.portions.analytes.annotations.status
samples.portions.analytes.annotations.submitter_id
samples.portions.analytes.annotations.updated_datetime
samples.portions.annotations.annotation_id
samples.portions.annotations.case_id
samples.portions.annotations.case_submitter_id
samples.portions.annotations.category
samples.portions.annotations.classification
samples.portions.annotations.created_datetime
samples.portions.annotations.creator
samples.portions.annotations.entity_id
samples.portions.annotations.entity_submitter_id
samples.portions.annotations.entity_type
samples.portions.annotations.legacy_created_datetime
samples.portions.annotations.legacy_updated_datetime
samples.portions.annotations.notes
samples.portions.annotations.state
samples.portions.annotations.status
samples.portions.annotations.submitter_id
samples.portions.annotations.updated_datetime
samples.portions.center.center_id
samples.portions.center.center_type
samples.portions.center.code
samples.portions.center.name
samples.portions.center.namespace
samples.portions.center.short_name
samples.portions.slides.created_datetime
samples.portions.slides.number_proliferating_cells
samples.portions.slides.percent_eosinophil_infiltration
samples.portions.slides.percent_granulocyte_infiltration
samples.portions.slides.percent_inflam_infiltration
samples.portions.slides.percent_lymphocyte_infiltration
samples.portions.slides.percent_monocyte_infiltration
samples.portions.slides.percent_necrosis
samples.portions.slides.percent_neutrophil_infiltration
samples.portions.slides.percent_normal_cells
samples.portions.slides.percent_stromal_cells
samples.portions.slides.percent_tumor_cells
samples.portions.slides.percent_tumor_nuclei
samples.portions.slides.section_location
samples.portions.slides.slide_id
samples.portions.slides.state
samples.portions.slides.submitter_id
samples.portions.slides.updated_datetime
samples.portions.slides.annotations.annotation_id
samples.portions.slides.annotations.case_id
samples.portions.slides.annotations.case_submitter_id
samples.portions.slides.annotations.category
samples.portions.slides.annotations.classification
samples.portions.slides.annotations.created_datetime
samples.portions.slides.annotations.creator
samples.portions.slides.annotations.entity_id
samples.portions.slides.annotations.entity_submitter_id
samples.portions.slides.annotations.entity_type
samples.portions.slides.annotations.legacy_created_datetime
samples.portions.slides.annotations.legacy_updated_datetime
samples.portions.slides.annotations.notes
samples.portions.slides.annotations.state
samples.portions.slides.annotations.status
samples.portions.slides.annotations.submitter_id
samples.portions.slides.annotations.updated_datetime
summary.file_count
summary.file_size
summary.data_categories.data_category
summary.data_categories.file_count
summary.experimental_strategies.experimental_strategy
summary.experimental_strategies.file_count
tissue_source_site.bcr_id
tissue_source_site.code
tissue_source_site.name
tissue_source_site.project
tissue_source_site.tissue_source_site_id

File Fields

Field Name
access
acl
created_datetime
data_category
data_format
data_type
error_type
experimental_strategy
file_id
file_name
file_size
file_state
md5sum
origin
platform
revision
state
state_comment
submitter_id
tags
type
updated_datetime
analysis.analysis_id
analysis.analysis_type
analysis.created_datetime
analysis.state
analysis.submitter_id
analysis.updated_datetime
analysis.workflow_end_datetime
analysis.workflow_link
analysis.workflow_start_datetime
analysis.workflow_type
analysis.workflow_version
analysis.input_files.access
analysis.input_files.created_datetime
analysis.input_files.data_category
analysis.input_files.data_format
analysis.input_files.data_type
analysis.input_files.error_type
analysis.input_files.experimental_strategy
analysis.input_files.file_id
analysis.input_files.file_name
analysis.input_files.file_size
analysis.input_files.file_state
analysis.input_files.md5sum
analysis.input_files.platform
analysis.input_files.revision
analysis.input_files.state
analysis.input_files.state_comment
analysis.input_files.submitter_id
analysis.input_files.updated_datetime
analysis.metadata.read_groups.adapter_name
analysis.metadata.read_groups.adapter_sequence
analysis.metadata.read_groups.base_caller_name
analysis.metadata.read_groups.base_caller_version
analysis.metadata.read_groups.created_datetime
analysis.metadata.read_groups.experiment_name
analysis.metadata.read_groups.flow_cell_barcode
analysis.metadata.read_groups.includes_spike_ins
analysis.metadata.read_groups.instrument_model
analysis.metadata.read_groups.is_paired_end
analysis.metadata.read_groups.library_name
analysis.metadata.read_groups.library_preparation_kit_catalog_number
analysis.metadata.read_groups.library_preparation_kit_name
analysis.metadata.read_groups.library_preparation_kit_vendor
analysis.metadata.read_groups.library_preparation_kit_version
analysis.metadata.read_groups.library_selection
analysis.metadata.read_groups.library_strand
analysis.metadata.read_groups.library_strategy
analysis.metadata.read_groups.platform
analysis.metadata.read_groups.read_group_id
analysis.metadata.read_groups.read_group_name
analysis.metadata.read_groups.read_length
analysis.metadata.read_groups.RIN
analysis.metadata.read_groups.sequencing_center
analysis.metadata.read_groups.sequencing_date
analysis.metadata.read_groups.size_selection_range
analysis.metadata.read_groups.spike_ins_concentration
analysis.metadata.read_groups.spike_ins_fasta
analysis.metadata.read_groups.state
analysis.metadata.read_groups.submitter_id
analysis.metadata.read_groups.target_capture_kit_catalog_number
analysis.metadata.read_groups.target_capture_kit_name
analysis.metadata.read_groups.target_capture_kit_target_region
analysis.metadata.read_groups.target_capture_kit_vendor
analysis.metadata.read_groups.target_capture_kit_version
analysis.metadata.read_groups.to_trim_adapter_sequence
analysis.metadata.read_groups.updated_datetime
analysis.metadata.read_groups.read_group_qcs.adapter_content
analysis.metadata.read_groups.read_group_qcs.basic_statistics
analysis.metadata.read_groups.read_group_qcs.created_datetime
analysis.metadata.read_groups.read_group_qcs.encoding
analysis.metadata.read_groups.read_group_qcs.fastq_name
analysis.metadata.read_groups.read_group_qcs.kmer_content
analysis.metadata.read_groups.read_group_qcs.overrepresented_sequences
analysis.metadata.read_groups.read_group_qcs.per_base_n_content
analysis.metadata.read_groups.read_group_qcs.per_base_sequence_content
analysis.metadata.read_groups.read_group_qcs.per_base_sequence_quality
analysis.metadata.read_groups.read_group_qcs.per_sequence_gc_content
analysis.metadata.read_groups.read_group_qcs.per_sequence_quality_score
analysis.metadata.read_groups.read_group_qcs.per_tile_sequence_quality
analysis.metadata.read_groups.read_group_qcs.percent_gc_content
analysis.metadata.read_groups.read_group_qcs.read_group_qc_id
analysis.metadata.read_groups.read_group_qcs.sequence_duplication_levels
analysis.metadata.read_groups.read_group_qcs.sequence_length_distribution
analysis.metadata.read_groups.read_group_qcs.state
analysis.metadata.read_groups.read_group_qcs.submitter_id
analysis.metadata.read_groups.read_group_qcs.total_sequences
analysis.metadata.read_groups.read_group_qcs.updated_datetime
analysis.metadata.read_groups.read_group_qcs.workflow_end_datetime
analysis.metadata.read_groups.read_group_qcs.workflow_link
analysis.metadata.read_groups.read_group_qcs.workflow_start_datetime
analysis.metadata.read_groups.read_group_qcs.workflow_type
analysis.metadata.read_groups.read_group_qcs.workflow_version
annotations.annotation_id
annotations.case_id
annotations.case_submitter_id
annotations.category
annotations.classification
annotations.created_datetime
annotations.creator
annotations.entity_id
annotations.entity_submitter_id
annotations.entity_type
annotations.legacy_created_datetime
annotations.legacy_updated_datetime
annotations.notes
annotations.state
annotations.status
annotations.submitter_id
annotations.updated_datetime
archive.archive_id
archive.created_datetime
archive.data_category
archive.data_format
archive.data_type
archive.error_type
archive.file_name
archive.file_size
archive.file_state
archive.md5sum
archive.revision
archive.state
archive.state_comment
archive.submitter_id
archive.updated_datetime
associated_entities.case_id
associated_entities.entity_id
associated_entities.entity_submitter_id
associated_entities.entity_type
cases.aliquot_ids
cases.analyte_ids
cases.case_id
cases.created_datetime
cases.days_to_index
cases.portion_ids
cases.sample_ids
cases.slide_ids
cases.state
cases.submitter_aliquot_ids
cases.submitter_analyte_ids
cases.submitter_id
cases.submitter_portion_ids
cases.submitter_sample_ids
cases.submitter_slide_ids
cases.updated_datetime
cases.annotations.annotation_id
cases.annotations.case_id
cases.annotations.case_submitter_id
cases.annotations.category
cases.annotations.classification
cases.annotations.created_datetime
cases.annotations.creator
cases.annotations.entity_id
cases.annotations.entity_submitter_id
cases.annotations.entity_type
cases.annotations.legacy_created_datetime
cases.annotations.legacy_updated_datetime
cases.annotations.notes
cases.annotations.state
cases.annotations.status
cases.annotations.submitter_id
cases.annotations.updated_datetime
cases.demographic.created_datetime
cases.demographic.demographic_id
cases.demographic.ethnicity
cases.demographic.gender
cases.demographic.race
cases.demographic.state
cases.demographic.submitter_id
cases.demographic.updated_datetime
cases.demographic.year_of_birth
cases.demographic.year_of_death
cases.diagnoses.age_at_diagnosis
cases.diagnoses.classification_of_tumor
cases.diagnoses.created_datetime
cases.diagnoses.days_to_birth
cases.diagnoses.days_to_death
cases.diagnoses.days_to_last_follow_up
cases.diagnoses.days_to_last_known_disease_status
cases.diagnoses.days_to_recurrence
cases.diagnoses.diagnosis_id
cases.diagnoses.last_known_disease_status
cases.diagnoses.morphology
cases.diagnoses.primary_diagnosis
cases.diagnoses.prior_malignancy
cases.diagnoses.progression_or_recurrence
cases.diagnoses.site_of_resection_or_biopsy
cases.diagnoses.state
cases.diagnoses.submitter_id
cases.diagnoses.tissue_or_organ_of_origin
cases.diagnoses.tumor_grade
cases.diagnoses.tumor_stage
cases.diagnoses.updated_datetime
cases.diagnoses.vital_status
cases.diagnoses.treatments.created_datetime
cases.diagnoses.treatments.days_to_treatment
cases.diagnoses.treatments.state
cases.diagnoses.treatments.submitter_id
cases.diagnoses.treatments.therapeutic_agents
cases.diagnoses.treatments.treatment_id
cases.diagnoses.treatments.treatment_intent_type
cases.diagnoses.treatments.treatment_or_therapy
cases.diagnoses.treatments.updated_datetime
cases.exposures.alcohol_history
cases.exposures.alcohol_intensity
cases.exposures.bmi
cases.exposures.cigarettes_per_day
cases.exposures.created_datetime
cases.exposures.exposure_id
cases.exposures.height
cases.exposures.state
cases.exposures.submitter_id
cases.exposures.updated_datetime
cases.exposures.weight
cases.exposures.years_smoked
cases.family_histories.created_datetime
cases.family_histories.family_history_id
cases.family_histories.relationship_age_at_diagnosis
cases.family_histories.relationship_gender
cases.family_histories.relationship_primary_diagnosis
cases.family_histories.relationship_type
cases.family_histories.relative_with_cancer_history
cases.family_histories.state
cases.family_histories.submitter_id
cases.family_histories.updated_datetime
cases.files.created_datetime
cases.files.error_type
cases.files.file_id
cases.files.file_name
cases.files.file_size
cases.files.file_state
cases.files.md5sum
cases.files.state
cases.files.state_comment
cases.files.submitter_id
cases.files.updated_datetime
cases.project.dbgap_accession_number
cases.project.disease_type
cases.project.name
cases.project.primary_site
cases.project.project_id
cases.project.released
cases.project.state
cases.project.program.dbgap_accession_number
cases.project.program.name
cases.project.program.program_id
cases.samples.composition
cases.samples.created_datetime
cases.samples.current_weight
cases.samples.days_to_collection
cases.samples.days_to_sample_procurement
cases.samples.freezing_method
cases.samples.initial_weight
cases.samples.intermediate_dimension
cases.samples.is_ffpe
cases.samples.longest_dimension
cases.samples.oct_embedded
cases.samples.pathology_report_uuid
cases.samples.preservation_method
cases.samples.sample_id
cases.samples.sample_type
cases.samples.sample_type_id
cases.samples.shortest_dimension
cases.samples.state
cases.samples.submitter_id
cases.samples.time_between_clamping_and_freezing
cases.samples.time_between_excision_and_freezing
cases.samples.tissue_type
cases.samples.tumor_code
cases.samples.tumor_code_id
cases.samples.tumor_descriptor
cases.samples.updated_datetime
cases.samples.annotations.annotation_id
cases.samples.annotations.case_id
cases.samples.annotations.case_submitter_id
cases.samples.annotations.category
cases.samples.annotations.classification
cases.samples.annotations.created_datetime
cases.samples.annotations.creator
cases.samples.annotations.entity_id
cases.samples.annotations.entity_submitter_id
cases.samples.annotations.entity_type
cases.samples.annotations.legacy_created_datetime
cases.samples.annotations.legacy_updated_datetime
cases.samples.annotations.notes
cases.samples.annotations.state
cases.samples.annotations.status
cases.samples.annotations.submitter_id
cases.samples.annotations.updated_datetime
cases.samples.portions.created_datetime
cases.samples.portions.creation_datetime
cases.samples.portions.is_ffpe
cases.samples.portions.portion_id
cases.samples.portions.portion_number
cases.samples.portions.state
cases.samples.portions.submitter_id
cases.samples.portions.updated_datetime
cases.samples.portions.weight
cases.samples.portions.analytes.a260_a280_ratio
cases.samples.portions.analytes.amount
cases.samples.portions.analytes.analyte_id
cases.samples.portions.analytes.analyte_type
cases.samples.portions.analytes.analyte_type_id
cases.samples.portions.analytes.concentration
cases.samples.portions.analytes.created_datetime
cases.samples.portions.analytes.spectrophotometer_method
cases.samples.portions.analytes.state
cases.samples.portions.analytes.submitter_id
cases.samples.portions.analytes.updated_datetime
cases.samples.portions.analytes.well_number
cases.samples.portions.analytes.aliquots.aliquot_id
cases.samples.portions.analytes.aliquots.amount
cases.samples.portions.analytes.aliquots.analyte_type
cases.samples.portions.analytes.aliquots.analyte_type_id
cases.samples.portions.analytes.aliquots.concentration
cases.samples.portions.analytes.aliquots.created_datetime
cases.samples.portions.analytes.aliquots.source_center
cases.samples.portions.analytes.aliquots.state
cases.samples.portions.analytes.aliquots.submitter_id
cases.samples.portions.analytes.aliquots.updated_datetime
cases.samples.portions.analytes.aliquots.annotations.annotation_id
cases.samples.portions.analytes.aliquots.annotations.case_id
cases.samples.portions.analytes.aliquots.annotations.case_submitter_id
cases.samples.portions.analytes.aliquots.annotations.category
cases.samples.portions.analytes.aliquots.annotations.classification
cases.samples.portions.analytes.aliquots.annotations.created_datetime
cases.samples.portions.analytes.aliquots.annotations.creator
cases.samples.portions.analytes.aliquots.annotations.entity_id
cases.samples.portions.analytes.aliquots.annotations.entity_submitter_id
cases.samples.portions.analytes.aliquots.annotations.entity_type
cases.samples.portions.analytes.aliquots.annotations.legacy_created_datetime
cases.samples.portions.analytes.aliquots.annotations.legacy_updated_datetime
cases.samples.portions.analytes.aliquots.annotations.notes
cases.samples.portions.analytes.aliquots.annotations.state
cases.samples.portions.analytes.aliquots.annotations.status
cases.samples.portions.analytes.aliquots.annotations.submitter_id
cases.samples.portions.analytes.aliquots.annotations.updated_datetime
cases.samples.portions.analytes.aliquots.center.center_id
cases.samples.portions.analytes.aliquots.center.center_type
cases.samples.portions.analytes.aliquots.center.code
cases.samples.portions.analytes.aliquots.center.name
cases.samples.portions.analytes.aliquots.center.namespace
cases.samples.portions.analytes.aliquots.center.short_name
cases.samples.portions.analytes.annotations.annotation_id
cases.samples.portions.analytes.annotations.case_id
cases.samples.portions.analytes.annotations.case_submitter_id
cases.samples.portions.analytes.annotations.category
cases.samples.portions.analytes.annotations.classification
cases.samples.portions.analytes.annotations.created_datetime
cases.samples.portions.analytes.annotations.creator
cases.samples.portions.analytes.annotations.entity_id
cases.samples.portions.analytes.annotations.entity_submitter_id
cases.samples.portions.analytes.annotations.entity_type
cases.samples.portions.analytes.annotations.legacy_created_datetime
cases.samples.portions.analytes.annotations.legacy_updated_datetime
cases.samples.portions.analytes.annotations.notes
cases.samples.portions.analytes.annotations.state
cases.samples.portions.analytes.annotations.status
cases.samples.portions.analytes.annotations.submitter_id
cases.samples.portions.analytes.annotations.updated_datetime
cases.samples.portions.annotations.annotation_id
cases.samples.portions.annotations.case_id
cases.samples.portions.annotations.case_submitter_id
cases.samples.portions.annotations.category
cases.samples.portions.annotations.classification
cases.samples.portions.annotations.created_datetime
cases.samples.portions.annotations.creator
cases.samples.portions.annotations.entity_id
cases.samples.portions.annotations.entity_submitter_id
cases.samples.portions.annotations.entity_type
cases.samples.portions.annotations.legacy_created_datetime
cases.samples.portions.annotations.legacy_updated_datetime
cases.samples.portions.annotations.notes
cases.samples.portions.annotations.state
cases.samples.portions.annotations.status
cases.samples.portions.annotations.submitter_id
cases.samples.portions.annotations.updated_datetime
cases.samples.portions.center.center_id
cases.samples.portions.center.center_type
cases.samples.portions.center.code
cases.samples.portions.center.name
cases.samples.portions.center.namespace
cases.samples.portions.center.short_name
cases.samples.portions.slides.created_datetime
cases.samples.portions.slides.number_proliferating_cells
cases.samples.portions.slides.percent_eosinophil_infiltration
cases.samples.portions.slides.percent_granulocyte_infiltration
cases.samples.portions.slides.percent_inflam_infiltration
cases.samples.portions.slides.percent_lymphocyte_infiltration
cases.samples.portions.slides.percent_monocyte_infiltration
cases.samples.portions.slides.percent_necrosis
cases.samples.portions.slides.percent_neutrophil_infiltration
cases.samples.portions.slides.percent_normal_cells
cases.samples.portions.slides.percent_stromal_cells
cases.samples.portions.slides.percent_tumor_cells
cases.samples.portions.slides.percent_tumor_nuclei
cases.samples.portions.slides.section_location
cases.samples.portions.slides.slide_id
cases.samples.portions.slides.state
cases.samples.portions.slides.submitter_id
cases.samples.portions.slides.updated_datetime
cases.samples.portions.slides.annotations.annotation_id
cases.samples.portions.slides.annotations.case_id
cases.samples.portions.slides.annotations.case_submitter_id
cases.samples.portions.slides.annotations.category
cases.samples.portions.slides.annotations.classification
cases.samples.portions.slides.annotations.created_datetime
cases.samples.portions.slides.annotations.creator
cases.samples.portions.slides.annotations.entity_id
cases.samples.portions.slides.annotations.entity_submitter_id
cases.samples.portions.slides.annotations.entity_type
cases.samples.portions.slides.annotations.legacy_created_datetime
cases.samples.portions.slides.annotations.legacy_updated_datetime
cases.samples.portions.slides.annotations.notes
cases.samples.portions.slides.annotations.state
cases.samples.portions.slides.annotations.status
cases.samples.portions.slides.annotations.submitter_id
cases.samples.portions.slides.annotations.updated_datetime
cases.summary.file_count
cases.summary.file_size
cases.summary.data_categories.data_category
cases.summary.data_categories.file_count
cases.summary.experimental_strategies.experimental_strategy
cases.summary.experimental_strategies.file_count
cases.tissue_source_site.bcr_id
cases.tissue_source_site.code
cases.tissue_source_site.name
cases.tissue_source_site.project
cases.tissue_source_site.tissue_source_site_id
center.center_id
center.center_type
center.code
center.name
center.namespace
center.short_name
downstream_analyses.analysis_id
downstream_analyses.analysis_type
downstream_analyses.created_datetime
downstream_analyses.state
downstream_analyses.submitter_id
downstream_analyses.updated_datetime
downstream_analyses.workflow_end_datetime
downstream_analyses.workflow_link
downstream_analyses.workflow_start_datetime
downstream_analyses.workflow_type
downstream_analyses.workflow_version
downstream_analyses.output_files.access
downstream_analyses.output_files.created_datetime
downstream_analyses.output_files.data_category
downstream_analyses.output_files.data_format
downstream_analyses.output_files.data_type
downstream_analyses.output_files.error_type
downstream_analyses.output_files.experimental_strategy
downstream_analyses.output_files.file_id
downstream_analyses.output_files.file_name
downstream_analyses.output_files.file_size
downstream_analyses.output_files.file_state
downstream_analyses.output_files.md5sum
downstream_analyses.output_files.platform
downstream_analyses.output_files.revision
downstream_analyses.output_files.state
downstream_analyses.output_files.state_comment
downstream_analyses.output_files.submitter_id
downstream_analyses.output_files.updated_datetime
index_files.access
index_files.created_datetime
index_files.data_category
index_files.data_format
index_files.data_type
index_files.error_type
index_files.experimental_strategy
index_files.file_id
index_files.file_name
index_files.file_size
index_files.file_state
index_files.md5sum
index_files.platform
index_files.revision
index_files.state
index_files.state_comment
index_files.submitter_id
index_files.updated_datetime
metadata_files.access
metadata_files.created_datetime
metadata_files.data_category
metadata_files.data_format
metadata_files.data_type
metadata_files.error_type
metadata_files.file_id
metadata_files.file_name
metadata_files.file_size
metadata_files.file_state
metadata_files.md5sum
metadata_files.state
metadata_files.state_comment
metadata_files.submitter_id
metadata_files.type
metadata_files.updated_datetime

Annotation Fields

Field Name
annotation_id
case_id
case_submitter_id
category
classification
created_datetime
entity_id
entity_submitter_id
entity_type
legacy_created_datetime
legacy_updated_datetime
notes
state
status
submitter_id
updated_datetime
project.code
project.dbgap_accession_number
project.disease_type
project.name
project.primary_site
project.program.dbgap_accession_number
project.program.name
project.program.program_id
project.project_id
project.released
project.state

Field Group Listing by Endpoint

Projects Field Groups

Field Group Name
program
summary
summary.data_categories
summary.experimental_strategies

Cases Field Groups

Field Group Name
annotations
demographic
diagnoses
diagnoses.treatments
exposures
family_histories
files
files.analysis
files.analysis.input_files
files.analysis.metadata
files.analysis.metadata.read_groups
files.analysis.metadata.read_groups.read_group_qcs
files.archive
files.cases
files.cases.annotations
files.cases.demographic
files.cases.diagnoses
files.cases.diagnoses.treatments
files.cases.exposures
files.cases.family_histories
files.cases.files
files.cases.project
files.cases.project.program
files.cases.samples
files.cases.samples.annotations
files.cases.samples.portions
files.cases.samples.portions.analytes
files.cases.samples.portions.analytes.aliquots
files.cases.samples.portions.analytes.aliquots.annotations
files.cases.samples.portions.analytes.aliquots.center
files.cases.samples.portions.analytes.annotations
files.cases.samples.portions.annotations
files.cases.samples.portions.center
files.cases.samples.portions.slides
files.cases.samples.portions.slides.annotations
files.cases.summary
files.cases.summary.data_categories
files.cases.summary.experimental_strategies
files.cases.tissue_source_site
files.center
files.downstream_analyses
files.downstream_analyses.output_files
files.index_files
files.metadata_files
project
project.program
samples
samples.annotations
samples.portions
samples.portions.analytes
samples.portions.analytes.aliquots
samples.portions.analytes.aliquots.annotations
samples.portions.analytes.aliquots.center
samples.portions.analytes.annotations
samples.portions.annotations
samples.portions.center
samples.portions.slides
samples.portions.slides.annotations
summary
summary.data_categories
summary.experimental_strategies
tissue_source_site

Files Field Groups

Field Group Name
analysis
analysis.input_files
analysis.metadata
analysis.metadata.read_groups
analysis.metadata.read_groups.read_group_qcs
annotations
archive
associated_entities
cases
cases.annotations
cases.demographic
cases.diagnoses
cases.diagnoses.treatments
cases.exposures
cases.family_histories
cases.files
cases.project
cases.project.program
cases.samples
cases.samples.annotations
cases.samples.portions
cases.samples.portions.analytes
cases.samples.portions.analytes.aliquots
cases.samples.portions.analytes.aliquots.annotations
cases.samples.portions.analytes.aliquots.center
cases.samples.portions.analytes.annotations
cases.samples.portions.annotations
cases.samples.portions.center
cases.samples.portions.slides
cases.samples.portions.slides.annotations
cases.summary
cases.summary.data_categories
cases.summary.experimental_strategies
cases.tissue_source_site
center
downstream_analyses
downstream_analyses.output_files
index_files
metadata_files

Annotations Field Groups

Field Group Name
project
project.program

GDC Conventions Supplemental

Field Group Name
File size Listed in bytes
Submitter id String supplied by submitter
Datetime Combination of date and time of day in the form [-]CCYY-MM-DDThh:mm:ss
Id GDC supplied UUID ID