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Appendix A: Available Fields

The GDC API's search and retrieval endpoints provide access to fields that correspond to properties defined in the GDC Data Dictionary. This appendix contains a list of fields available at each endpoint, and a list of field groups accessible via the expand parameter.

Field Listing by Endpoint

Project Fields

Field Name
dbgap_accession_number
disease_type
name
primary_site
project_id
released
state
program.dbgap_accession_number
program.name
program.program_id
summary.case_count
summary.file_count
summary.file_size
summary.data_categories.case_count
summary.data_categories.data_category
summary.data_categories.file_count
summary.experimental_strategies.case_count
summary.experimental_strategies.experimental_strategy
summary.experimental_strategies.file_count

Case Fields

Field Name
aliquot_ids
analyte_ids
case_id
created_datetime
days_to_index
portion_ids
sample_ids
slide_ids
state
submitter_aliquot_ids
submitter_analyte_ids
submitter_id
submitter_portion_ids
submitter_sample_ids
submitter_slide_ids
updated_datetime
annotations.annotation_id
annotations.case_id
annotations.case_submitter_id
annotations.category
annotations.classification
annotations.created_datetime
annotations.creator
annotations.entity_id
annotations.entity_submitter_id
annotations.entity_type
annotations.legacy_created_datetime
annotations.legacy_updated_datetime
annotations.notes
annotations.state
annotations.status
annotations.submitter_id
annotations.updated_datetime
demographic.created_datetime
demographic.demographic_id
demographic.ethnicity
demographic.gender
demographic.race
demographic.state
demographic.submitter_id
demographic.updated_datetime
demographic.year_of_birth
demographic.year_of_death
diagnoses.age_at_diagnosis
diagnoses.classification_of_tumor
diagnoses.created_datetime
diagnoses.days_to_birth
diagnoses.days_to_death
diagnoses.days_to_last_follow_up
diagnoses.days_to_last_known_disease_status
diagnoses.days_to_recurrence
diagnoses.diagnosis_id
diagnoses.last_known_disease_status
diagnoses.morphology
diagnoses.primary_diagnosis
diagnoses.prior_malignancy
diagnoses.progression_or_recurrence
diagnoses.site_of_resection_or_biopsy
diagnoses.state
diagnoses.submitter_id
diagnoses.tissue_or_organ_of_origin
diagnoses.tumor_grade
diagnoses.tumor_stage
diagnoses.updated_datetime
diagnoses.vital_status
diagnoses.treatments.created_datetime
diagnoses.treatments.days_to_treatment
diagnoses.treatments.state
diagnoses.treatments.submitter_id
diagnoses.treatments.therapeutic_agents
diagnoses.treatments.treatment_id
diagnoses.treatments.treatment_intent_type
diagnoses.treatments.treatment_or_therapy
diagnoses.treatments.updated_datetime
exposures.alcohol_history
exposures.alcohol_intensity
exposures.bmi
exposures.cigarettes_per_day
exposures.created_datetime
exposures.exposure_id
exposures.height
exposures.state
exposures.submitter_id
exposures.updated_datetime
exposures.weight
exposures.years_smoked
family_histories.created_datetime
family_histories.family_history_id
family_histories.relationship_age_at_diagnosis
family_histories.relationship_gender
family_histories.relationship_primary_diagnosis
family_histories.relationship_type
family_histories.relative_with_cancer_history
family_histories.state
family_histories.submitter_id
family_histories.updated_datetime
files.access
files.acl
files.created_datetime
files.data_category
files.data_format
files.data_type
files.error_type
files.experimental_strategy
files.file_id
files.file_name
files.file_size
files.file_state
files.md5sum
files.origin
files.platform
files.revision
files.state
files.state_comment
files.submitter_id
files.tags
files.type
files.updated_datetime
files.analysis.analysis_id
files.analysis.analysis_type
files.analysis.created_datetime
files.analysis.state
files.analysis.submitter_id
files.analysis.updated_datetime
files.analysis.workflow_end_datetime
files.analysis.workflow_link
files.analysis.workflow_start_datetime
files.analysis.workflow_type
files.analysis.workflow_version
files.analysis.input_files.access
files.analysis.input_files.created_datetime
files.analysis.input_files.data_category
files.analysis.input_files.data_format
files.analysis.input_files.data_type
files.analysis.input_files.error_type
files.analysis.input_files.experimental_strategy
files.analysis.input_files.file_id
files.analysis.input_files.file_name
files.analysis.input_files.file_size
files.analysis.input_files.file_state
files.analysis.input_files.md5sum
files.analysis.input_files.platform
files.analysis.input_files.revision
files.analysis.input_files.state
files.analysis.input_files.state_comment
files.analysis.input_files.submitter_id
files.analysis.input_files.updated_datetime
files.analysis.metadata.read_groups.adapter_name
files.analysis.metadata.read_groups.adapter_sequence
files.analysis.metadata.read_groups.base_caller_name
files.analysis.metadata.read_groups.base_caller_version
files.analysis.metadata.read_groups.created_datetime
files.analysis.metadata.read_groups.experiment_name
files.analysis.metadata.read_groups.flow_cell_barcode
files.analysis.metadata.read_groups.includes_spike_ins
files.analysis.metadata.read_groups.instrument_model
files.analysis.metadata.read_groups.is_paired_end
files.analysis.metadata.read_groups.library_name
files.analysis.metadata.read_groups.library_preparation_kit_catalog_number
files.analysis.metadata.read_groups.library_preparation_kit_name
files.analysis.metadata.read_groups.library_preparation_kit_vendor
files.analysis.metadata.read_groups.library_preparation_kit_version
files.analysis.metadata.read_groups.library_selection
files.analysis.metadata.read_groups.library_strand
files.analysis.metadata.read_groups.library_strategy
files.analysis.metadata.read_groups.platform
files.analysis.metadata.read_groups.read_group_id
files.analysis.metadata.read_groups.read_group_name
files.analysis.metadata.read_groups.read_length
files.analysis.metadata.read_groups.RIN
files.analysis.metadata.read_groups.sequencing_center
files.analysis.metadata.read_groups.sequencing_date
files.analysis.metadata.read_groups.size_selection_range
files.analysis.metadata.read_groups.spike_ins_concentration
files.analysis.metadata.read_groups.spike_ins_fasta
files.analysis.metadata.read_groups.state
files.analysis.metadata.read_groups.submitter_id
files.analysis.metadata.read_groups.target_capture_kit_catalog_number
files.analysis.metadata.read_groups.target_capture_kit_name
files.analysis.metadata.read_groups.target_capture_kit_target_region
files.analysis.metadata.read_groups.target_capture_kit_vendor
files.analysis.metadata.read_groups.target_capture_kit_version
files.analysis.metadata.read_groups.to_trim_adapter_sequence
files.analysis.metadata.read_groups.updated_datetime
files.analysis.metadata.read_groups.read_group_qcs.adapter_content
files.analysis.metadata.read_groups.read_group_qcs.basic_statistics
files.analysis.metadata.read_groups.read_group_qcs.created_datetime
files.analysis.metadata.read_groups.read_group_qcs.encoding
files.analysis.metadata.read_groups.read_group_qcs.fastq_name
files.analysis.metadata.read_groups.read_group_qcs.kmer_content
files.analysis.metadata.read_groups.read_group_qcs.overrepresented_sequences
files.analysis.metadata.read_groups.read_group_qcs.per_base_n_content
files.analysis.metadata.read_groups.read_group_qcs.per_base_sequence_content
files.analysis.metadata.read_groups.read_group_qcs.per_base_sequence_quality
files.analysis.metadata.read_groups.read_group_qcs.per_sequence_gc_content
files.analysis.metadata.read_groups.read_group_qcs.per_sequence_quality_score
files.analysis.metadata.read_groups.read_group_qcs.per_tile_sequence_quality
files.analysis.metadata.read_groups.read_group_qcs.percent_gc_content
files.analysis.metadata.read_groups.read_group_qcs.read_group_qc_id
files.analysis.metadata.read_groups.read_group_qcs.sequence_duplication_levels
files.analysis.metadata.read_groups.read_group_qcs.sequence_length_distribution
files.analysis.metadata.read_groups.read_group_qcs.state
files.analysis.metadata.read_groups.read_group_qcs.submitter_id
files.analysis.metadata.read_groups.read_group_qcs.total_sequences
files.analysis.metadata.read_groups.read_group_qcs.updated_datetime
files.analysis.metadata.read_groups.read_group_qcs.workflow_end_datetime
files.analysis.metadata.read_groups.read_group_qcs.workflow_link
files.analysis.metadata.read_groups.read_group_qcs.workflow_start_datetime
files.analysis.metadata.read_groups.read_group_qcs.workflow_type
files.analysis.metadata.read_groups.read_group_qcs.workflow_version
files.archive.archive_id
files.archive.created_datetime
files.archive.data_category
files.archive.data_format
files.archive.data_type
files.archive.error_type
files.archive.file_name
files.archive.file_size
files.archive.file_state
files.archive.md5sum
files.archive.revision
files.archive.state
files.archive.state_comment
files.archive.submitter_id
files.archive.updated_datetime
files.cases.aliquot_ids
files.cases.analyte_ids
files.cases.case_id
files.cases.created_datetime
files.cases.days_to_index
files.cases.portion_ids
files.cases.sample_ids
files.cases.slide_ids
files.cases.state
files.cases.submitter_aliquot_ids
files.cases.submitter_analyte_ids
files.cases.submitter_id
files.cases.submitter_portion_ids
files.cases.submitter_sample_ids
files.cases.submitter_slide_ids
files.cases.updated_datetime
files.cases.annotations.annotation_id
files.cases.annotations.case_id
files.cases.annotations.case_submitter_id
files.cases.annotations.category
files.cases.annotations.classification
files.cases.annotations.created_datetime
files.cases.annotations.creator
files.cases.annotations.entity_id
files.cases.annotations.entity_submitter_id
files.cases.annotations.entity_type
files.cases.annotations.legacy_created_datetime
files.cases.annotations.legacy_updated_datetime
files.cases.annotations.notes
files.cases.annotations.state
files.cases.annotations.status
files.cases.annotations.submitter_id
files.cases.annotations.updated_datetime
files.cases.demographic.created_datetime
files.cases.demographic.demographic_id
files.cases.demographic.ethnicity
files.cases.demographic.gender
files.cases.demographic.race
files.cases.demographic.state
files.cases.demographic.submitter_id
files.cases.demographic.updated_datetime
files.cases.demographic.year_of_birth
files.cases.demographic.year_of_death
files.cases.diagnoses.age_at_diagnosis
files.cases.diagnoses.classification_of_tumor
files.cases.diagnoses.created_datetime
files.cases.diagnoses.days_to_birth
files.cases.diagnoses.days_to_death
files.cases.diagnoses.days_to_last_follow_up
files.cases.diagnoses.days_to_last_known_disease_status
files.cases.diagnoses.days_to_recurrence
files.cases.diagnoses.diagnosis_id
files.cases.diagnoses.last_known_disease_status
files.cases.diagnoses.morphology
files.cases.diagnoses.primary_diagnosis
files.cases.diagnoses.prior_malignancy
files.cases.diagnoses.progression_or_recurrence
files.cases.diagnoses.site_of_resection_or_biopsy
files.cases.diagnoses.state
files.cases.diagnoses.submitter_id
files.cases.diagnoses.tissue_or_organ_of_origin
files.cases.diagnoses.tumor_grade
files.cases.diagnoses.tumor_stage
files.cases.diagnoses.updated_datetime
files.cases.diagnoses.vital_status
files.cases.diagnoses.treatments.created_datetime
files.cases.diagnoses.treatments.days_to_treatment
files.cases.diagnoses.treatments.state
files.cases.diagnoses.treatments.submitter_id
files.cases.diagnoses.treatments.therapeutic_agents
files.cases.diagnoses.treatments.treatment_id
files.cases.diagnoses.treatments.treatment_intent_type
files.cases.diagnoses.treatments.treatment_or_therapy
files.cases.diagnoses.treatments.updated_datetime
files.cases.exposures.alcohol_history
files.cases.exposures.alcohol_intensity
files.cases.exposures.bmi
files.cases.exposures.cigarettes_per_day
files.cases.exposures.created_datetime
files.cases.exposures.exposure_id
files.cases.exposures.height
files.cases.exposures.state
files.cases.exposures.submitter_id
files.cases.exposures.updated_datetime
files.cases.exposures.weight
files.cases.exposures.years_smoked
files.cases.family_histories.created_datetime
files.cases.family_histories.family_history_id
files.cases.family_histories.relationship_age_at_diagnosis
files.cases.family_histories.relationship_gender
files.cases.family_histories.relationship_primary_diagnosis
files.cases.family_histories.relationship_type
files.cases.family_histories.relative_with_cancer_history
files.cases.family_histories.state
files.cases.family_histories.submitter_id
files.cases.family_histories.updated_datetime
files.cases.files.created_datetime
files.cases.files.error_type
files.cases.files.file_id
files.cases.files.file_name
files.cases.files.file_size
files.cases.files.file_state
files.cases.files.md5sum
files.cases.files.state
files.cases.files.state_comment
files.cases.files.submitter_id
files.cases.files.updated_datetime
files.cases.follow_ups.adverse_event
files.cases.follow_ups.adverse_event_grade
files.cases.follow_ups.aids_risk_factors
files.cases.follow_ups.barretts_esophagus_goblet_cells_present
files.cases.follow_ups.bmi
files.cases.follow_ups.body_surface_area
files.cases.follow_ups.cause_of_response
files.cases.follow_ups.cd4_count
files.cases.follow_ups.cdc_hiv_risk_factors
files.cases.follow_ups.comorbidities
files.cases.follow_ups.comorbidity
files.cases.follow_ups.comorbidity_method_of_diagnosis
files.cases.follow_ups.created_datetime
files.cases.follow_ups.days_to_adverse_event
files.cases.follow_ups.days_to_comorbidity
files.cases.follow_ups.days_to_first_event
files.cases.follow_ups.days_to_follow_up
files.cases.follow_ups.days_to_imaging
files.cases.follow_ups.days_to_progression
files.cases.follow_ups.days_to_progression_free
files.cases.follow_ups.days_to_recurrence
files.cases.follow_ups.days_to_risk_factor
files.cases.follow_ups.diabetes_treatment_type
files.cases.follow_ups.discontiguous_lesion_count
files.cases.follow_ups.disease_response
files.cases.follow_ups.dlco_ref_predictive_percent
files.cases.follow_ups.ecog_performance_status
files.cases.follow_ups.evidence_of_progression_type
files.cases.follow_ups.evidence_of_recurrence_type
files.cases.follow_ups.eye_color
files.cases.follow_ups.fev1_fvc_post_bronch_percent
files.cases.follow_ups.fev1_fvc_pre_bronch_percent
files.cases.follow_ups.fev1_ref_post_bronch_percent
files.cases.follow_ups.fev1_ref_pre_bronch_percent
files.cases.follow_ups.first_event
files.cases.follow_ups.follow_up_id
files.cases.follow_ups.haart_treatment_indicator
files.cases.follow_ups.height
files.cases.follow_ups.hepatitis_sustained_virological_response
files.cases.follow_ups.history_of_tumor
files.cases.follow_ups.history_of_tumor_type
files.cases.follow_ups.hiv_viral_load
files.cases.follow_ups.hormonal_contraceptive_type
files.cases.follow_ups.hormonal_contraceptive_use
files.cases.follow_ups.hormone_replacement_therapy_type
files.cases.follow_ups.hpv_positive_type
files.cases.follow_ups.hysterectomy_margins_involved
files.cases.follow_ups.hysterectomy_type
files.cases.follow_ups.imaging_anatomic_site
files.cases.follow_ups.imaging_findings
files.cases.follow_ups.imaging_result
files.cases.follow_ups.imaging_suv
files.cases.follow_ups.imaging_suv_max
files.cases.follow_ups.imaging_type
files.cases.follow_ups.immunosuppressive_treatment_type
files.cases.follow_ups.karnofsky_performance_status
files.cases.follow_ups.menopause_status
files.cases.follow_ups.molecular_tests.aa_change
files.cases.follow_ups.molecular_tests.aneuploidy
files.cases.follow_ups.molecular_tests.antigen
files.cases.follow_ups.molecular_tests.biospecimen_type
files.cases.follow_ups.molecular_tests.biospecimen_volume
files.cases.follow_ups.molecular_tests.blood_test_normal_range_lower
files.cases.follow_ups.molecular_tests.blood_test_normal_range_upper
files.cases.follow_ups.molecular_tests.cell_count
files.cases.follow_ups.molecular_tests.chromosomal_translocation
files.cases.follow_ups.molecular_tests.chromosome
files.cases.follow_ups.molecular_tests.chromosome_arm
files.cases.follow_ups.molecular_tests.clonality
files.cases.follow_ups.molecular_tests.copy_number
files.cases.follow_ups.molecular_tests.created_datetime
files.cases.follow_ups.molecular_tests.cytoband
files.cases.follow_ups.molecular_tests.days_to_test
files.cases.follow_ups.molecular_tests.exon
files.cases.follow_ups.molecular_tests.gene_symbol
files.cases.follow_ups.molecular_tests.histone_family
files.cases.follow_ups.molecular_tests.histone_variant
files.cases.follow_ups.molecular_tests.hpv_strain
files.cases.follow_ups.molecular_tests.intron
files.cases.follow_ups.molecular_tests.laboratory_test
files.cases.follow_ups.molecular_tests.loci_abnormal_count
files.cases.follow_ups.molecular_tests.loci_count
files.cases.follow_ups.molecular_tests.locus
files.cases.follow_ups.molecular_tests.mismatch_repair_mutation
files.cases.follow_ups.molecular_tests.mitotic_count
files.cases.follow_ups.molecular_tests.mitotic_total_area
files.cases.follow_ups.molecular_tests.molecular_analysis_method
files.cases.follow_ups.molecular_tests.molecular_consequence
files.cases.follow_ups.molecular_tests.molecular_test_id
files.cases.follow_ups.molecular_tests.mutation_codon
files.cases.follow_ups.molecular_tests.pathogenicity
files.cases.follow_ups.molecular_tests.ploidy
files.cases.follow_ups.molecular_tests.second_exon
files.cases.follow_ups.molecular_tests.second_gene_symbol
files.cases.follow_ups.molecular_tests.specialized_molecular_test
files.cases.follow_ups.molecular_tests.staining_intensity_scale
files.cases.follow_ups.molecular_tests.staining_intensity_value
files.cases.follow_ups.molecular_tests.state
files.cases.follow_ups.molecular_tests.submitter_id
files.cases.follow_ups.molecular_tests.test_analyte_type
files.cases.follow_ups.molecular_tests.test_result
files.cases.follow_ups.molecular_tests.test_units
files.cases.follow_ups.molecular_tests.test_value
files.cases.follow_ups.molecular_tests.test_value_range
files.cases.follow_ups.molecular_tests.timepoint_category
files.cases.follow_ups.molecular_tests.transcript
files.cases.follow_ups.molecular_tests.updated_datetime
files.cases.follow_ups.molecular_tests.variant_origin
files.cases.follow_ups.molecular_tests.variant_type
files.cases.follow_ups.molecular_tests.zygosity
files.cases.follow_ups.nadir_cd4_count
files.cases.follow_ups.other_clinical_attributes.aids_risk_factors
files.cases.follow_ups.other_clinical_attributes.bmi
files.cases.follow_ups.other_clinical_attributes.body_surface_area
files.cases.follow_ups.other_clinical_attributes.cd4_count
files.cases.follow_ups.other_clinical_attributes.cdc_hiv_risk_factors
files.cases.follow_ups.other_clinical_attributes.comorbidities
files.cases.follow_ups.other_clinical_attributes.comorbidity_method_of_diagnosis
files.cases.follow_ups.other_clinical_attributes.created_datetime
files.cases.follow_ups.other_clinical_attributes.days_to_comorbidity
files.cases.follow_ups.other_clinical_attributes.days_to_risk_factor
files.cases.follow_ups.other_clinical_attributes.diabetes_treatment_type
files.cases.follow_ups.other_clinical_attributes.dlco_ref_predictive_percent
files.cases.follow_ups.other_clinical_attributes.exercise_frequency_weekly
files.cases.follow_ups.other_clinical_attributes.eye_color
files.cases.follow_ups.other_clinical_attributes.fev1_fvc_post_bronch_percent
files.cases.follow_ups.other_clinical_attributes.fev1_fvc_pre_bronch_percent
files.cases.follow_ups.other_clinical_attributes.fev1_ref_post_bronch_percent
files.cases.follow_ups.other_clinical_attributes.fev1_ref_pre_bronch_percent
files.cases.follow_ups.other_clinical_attributes.haart_treatment_indicator
files.cases.follow_ups.other_clinical_attributes.height
files.cases.follow_ups.other_clinical_attributes.hepatitis_sustained_virological_response
files.cases.follow_ups.other_clinical_attributes.hiv_viral_load
files.cases.follow_ups.other_clinical_attributes.hormonal_contraceptive_type
files.cases.follow_ups.other_clinical_attributes.hormonal_contraceptive_use
files.cases.follow_ups.other_clinical_attributes.hormonal_replacement_therapy_status
files.cases.follow_ups.other_clinical_attributes.hormone_replacement_therapy_type
files.cases.follow_ups.other_clinical_attributes.hysterectomy_margins_involved
files.cases.follow_ups.other_clinical_attributes.hysterectomy_type
files.cases.follow_ups.other_clinical_attributes.immunosuppressive_treatment_type
files.cases.follow_ups.other_clinical_attributes.menopause_status
files.cases.follow_ups.other_clinical_attributes.myasthenia_gravis_classification
files.cases.follow_ups.other_clinical_attributes.nadir_cd4_count
files.cases.follow_ups.other_clinical_attributes.nononcologic_therapeutic_agents
files.cases.follow_ups.other_clinical_attributes.number_of_pregnancies
files.cases.follow_ups.other_clinical_attributes.other_clinical_attribute_id
files.cases.follow_ups.other_clinical_attributes.oxygen_use_indicator
files.cases.follow_ups.other_clinical_attributes.oxygen_use_type
files.cases.follow_ups.other_clinical_attributes.pancreatitis_onset_year
files.cases.follow_ups.other_clinical_attributes.pregnancy_count
files.cases.follow_ups.other_clinical_attributes.pregnancy_outcome
files.cases.follow_ups.other_clinical_attributes.pregnant_at_diagnosis
files.cases.follow_ups.other_clinical_attributes.premature_at_birth
files.cases.follow_ups.other_clinical_attributes.reflux_treatment_type
files.cases.follow_ups.other_clinical_attributes.risk_factor_method_of_diagnosis
files.cases.follow_ups.other_clinical_attributes.risk_factor_treatment
files.cases.follow_ups.other_clinical_attributes.risk_factors
files.cases.follow_ups.other_clinical_attributes.state
files.cases.follow_ups.other_clinical_attributes.submitter_id
files.cases.follow_ups.other_clinical_attributes.timepoint_category
files.cases.follow_ups.other_clinical_attributes.treatment_frequency
files.cases.follow_ups.other_clinical_attributes.undescended_testis_corrected
files.cases.follow_ups.other_clinical_attributes.undescended_testis_corrected_age
files.cases.follow_ups.other_clinical_attributes.undescended_testis_corrected_laterality
files.cases.follow_ups.other_clinical_attributes.undescended_testis_corrected_method
files.cases.follow_ups.other_clinical_attributes.undescended_testis_history
files.cases.follow_ups.other_clinical_attributes.undescended_testis_history_laterality
files.cases.follow_ups.other_clinical_attributes.updated_datetime
files.cases.follow_ups.other_clinical_attributes.viral_hepatitis_serologies
files.cases.follow_ups.other_clinical_attributes.viral_hepatitis_serology_tests
files.cases.follow_ups.other_clinical_attributes.weeks_gestation_at_birth
files.cases.follow_ups.other_clinical_attributes.weight
files.cases.follow_ups.pancreatitis_onset_year
files.cases.follow_ups.peritoneal_washing_results
files.cases.follow_ups.pregnancy_count
files.cases.follow_ups.pregnancy_outcome
files.cases.follow_ups.procedures_performed
files.cases.follow_ups.progression_or_recurrence
files.cases.follow_ups.progression_or_recurrence_anatomic_site
files.cases.follow_ups.progression_or_recurrence_type
files.cases.follow_ups.recist_targeted_regions_number
files.cases.follow_ups.recist_targeted_regions_sum
files.cases.follow_ups.reflux_treatment_type
files.cases.follow_ups.risk_factor
files.cases.follow_ups.risk_factor_method_of_diagnosis
files.cases.follow_ups.risk_factor_treatment
files.cases.follow_ups.risk_factors
files.cases.follow_ups.scan_tracer_used
files.cases.follow_ups.state
files.cases.follow_ups.submitter_id
files.cases.follow_ups.timepoint_category
files.cases.follow_ups.treatment_emergent_adverse_event
files.cases.follow_ups.undescended_testis_corrected
files.cases.follow_ups.undescended_testis_corrected_age
files.cases.follow_ups.undescended_testis_corrected_laterality
files.cases.follow_ups.undescended_testis_corrected_method
files.cases.follow_ups.undescended_testis_history
files.cases.follow_ups.undescended_testis_history_laterality
files.cases.follow_ups.updated_datetime
files.cases.follow_ups.viral_hepatitis_serologies
files.cases.follow_ups.weight
files.cases.follow_ups.year_of_follow_up
files.cases.project.dbgap_accession_number
files.cases.project.disease_type
files.cases.project.name
files.cases.project.primary_site
files.cases.project.project_id
files.cases.project.released
files.cases.project.state
files.cases.project.program.dbgap_accession_number
files.cases.project.program.name
files.cases.project.program.program_id
files.cases.samples.composition
files.cases.samples.created_datetime
files.cases.samples.current_weight
files.cases.samples.days_to_collection
files.cases.samples.days_to_sample_procurement
files.cases.samples.freezing_method
files.cases.samples.initial_weight
files.cases.samples.intermediate_dimension
files.cases.samples.is_ffpe
files.cases.samples.longest_dimension
files.cases.samples.oct_embedded
files.cases.samples.pathology_report_uuid
files.cases.samples.preservation_method
files.cases.samples.sample_id
files.cases.samples.sample_type
files.cases.samples.sample_type_id
files.cases.samples.shortest_dimension
files.cases.samples.state
files.cases.samples.submitter_id
files.cases.samples.time_between_clamping_and_freezing
files.cases.samples.time_between_excision_and_freezing
files.cases.samples.tissue_type
files.cases.samples.tumor_code
files.cases.samples.tumor_code_id
files.cases.samples.tumor_descriptor
files.cases.samples.updated_datetime
files.cases.samples.annotations.annotation_id
files.cases.samples.annotations.case_id
files.cases.samples.annotations.case_submitter_id
files.cases.samples.annotations.category
files.cases.samples.annotations.classification
files.cases.samples.annotations.created_datetime
files.cases.samples.annotations.creator
files.cases.samples.annotations.entity_id
files.cases.samples.annotations.entity_submitter_id
files.cases.samples.annotations.entity_type
files.cases.samples.annotations.legacy_created_datetime
files.cases.samples.annotations.legacy_updated_datetime
files.cases.samples.annotations.notes
files.cases.samples.annotations.state
files.cases.samples.annotations.status
files.cases.samples.annotations.submitter_id
files.cases.samples.annotations.updated_datetime
files.cases.samples.portions.created_datetime
files.cases.samples.portions.creation_datetime
files.cases.samples.portions.is_ffpe
files.cases.samples.portions.portion_id
files.cases.samples.portions.portion_number
files.cases.samples.portions.state
files.cases.samples.portions.submitter_id
files.cases.samples.portions.updated_datetime
files.cases.samples.portions.weight
files.cases.samples.portions.analytes.a260_a280_ratio
files.cases.samples.portions.analytes.amount
files.cases.samples.portions.analytes.analyte_id
files.cases.samples.portions.analytes.analyte_type
files.cases.samples.portions.analytes.analyte_type_id
files.cases.samples.portions.analytes.concentration
files.cases.samples.portions.analytes.created_datetime
files.cases.samples.portions.analytes.spectrophotometer_method
files.cases.samples.portions.analytes.state
files.cases.samples.portions.analytes.submitter_id
files.cases.samples.portions.analytes.updated_datetime
files.cases.samples.portions.analytes.well_number
files.cases.samples.portions.analytes.aliquots.aliquot_id
files.cases.samples.portions.analytes.aliquots.amount
files.cases.samples.portions.analytes.aliquots.analyte_type
files.cases.samples.portions.analytes.aliquots.analyte_type_id
files.cases.samples.portions.analytes.aliquots.concentration
files.cases.samples.portions.analytes.aliquots.created_datetime
files.cases.samples.portions.analytes.aliquots.source_center
files.cases.samples.portions.analytes.aliquots.state
files.cases.samples.portions.analytes.aliquots.submitter_id
files.cases.samples.portions.analytes.aliquots.updated_datetime
files.cases.samples.portions.analytes.aliquots.annotations.annotation_id
files.cases.samples.portions.analytes.aliquots.annotations.case_id
files.cases.samples.portions.analytes.aliquots.annotations.case_submitter_id
files.cases.samples.portions.analytes.aliquots.annotations.category
files.cases.samples.portions.analytes.aliquots.annotations.classification
files.cases.samples.portions.analytes.aliquots.annotations.created_datetime
files.cases.samples.portions.analytes.aliquots.annotations.creator
files.cases.samples.portions.analytes.aliquots.annotations.entity_id
files.cases.samples.portions.analytes.aliquots.annotations.entity_submitter_id
files.cases.samples.portions.analytes.aliquots.annotations.entity_type
files.cases.samples.portions.analytes.aliquots.annotations.legacy_created_datetime
files.cases.samples.portions.analytes.aliquots.annotations.legacy_updated_datetime
files.cases.samples.portions.analytes.aliquots.annotations.notes
files.cases.samples.portions.analytes.aliquots.annotations.state
files.cases.samples.portions.analytes.aliquots.annotations.status
files.cases.samples.portions.analytes.aliquots.annotations.submitter_id
files.cases.samples.portions.analytes.aliquots.annotations.updated_datetime
files.cases.samples.portions.analytes.aliquots.center.center_id
files.cases.samples.portions.analytes.aliquots.center.center_type
files.cases.samples.portions.analytes.aliquots.center.code
files.cases.samples.portions.analytes.aliquots.center.name
files.cases.samples.portions.analytes.aliquots.center.namespace
files.cases.samples.portions.analytes.aliquots.center.short_name
files.cases.samples.portions.analytes.annotations.annotation_id
files.cases.samples.portions.analytes.annotations.case_id
files.cases.samples.portions.analytes.annotations.case_submitter_id
files.cases.samples.portions.analytes.annotations.category
files.cases.samples.portions.analytes.annotations.classification
files.cases.samples.portions.analytes.annotations.created_datetime
files.cases.samples.portions.analytes.annotations.creator
files.cases.samples.portions.analytes.annotations.entity_id
files.cases.samples.portions.analytes.annotations.entity_submitter_id
files.cases.samples.portions.analytes.annotations.entity_type
files.cases.samples.portions.analytes.annotations.legacy_created_datetime
files.cases.samples.portions.analytes.annotations.legacy_updated_datetime
files.cases.samples.portions.analytes.annotations.notes
files.cases.samples.portions.analytes.annotations.state
files.cases.samples.portions.analytes.annotations.status
files.cases.samples.portions.analytes.annotations.submitter_id
files.cases.samples.portions.analytes.annotations.updated_datetime
files.cases.samples.portions.annotations.annotation_id
files.cases.samples.portions.annotations.case_id
files.cases.samples.portions.annotations.case_submitter_id
files.cases.samples.portions.annotations.category
files.cases.samples.portions.annotations.classification
files.cases.samples.portions.annotations.created_datetime
files.cases.samples.portions.annotations.creator
files.cases.samples.portions.annotations.entity_id
files.cases.samples.portions.annotations.entity_submitter_id
files.cases.samples.portions.annotations.entity_type
files.cases.samples.portions.annotations.legacy_created_datetime
files.cases.samples.portions.annotations.legacy_updated_datetime
files.cases.samples.portions.annotations.notes
files.cases.samples.portions.annotations.state
files.cases.samples.portions.annotations.status
files.cases.samples.portions.annotations.submitter_id
files.cases.samples.portions.annotations.updated_datetime
files.cases.samples.portions.center.center_id
files.cases.samples.portions.center.center_type
files.cases.samples.portions.center.code
files.cases.samples.portions.center.name
files.cases.samples.portions.center.namespace
files.cases.samples.portions.center.short_name
files.cases.samples.portions.slides.created_datetime
files.cases.samples.portions.slides.number_proliferating_cells
files.cases.samples.portions.slides.percent_eosinophil_infiltration
files.cases.samples.portions.slides.percent_granulocyte_infiltration
files.cases.samples.portions.slides.percent_inflam_infiltration
files.cases.samples.portions.slides.percent_lymphocyte_infiltration
files.cases.samples.portions.slides.percent_monocyte_infiltration
files.cases.samples.portions.slides.percent_necrosis
files.cases.samples.portions.slides.percent_neutrophil_infiltration
files.cases.samples.portions.slides.percent_normal_cells
files.cases.samples.portions.slides.percent_stromal_cells
files.cases.samples.portions.slides.percent_tumor_cells
files.cases.samples.portions.slides.percent_tumor_nuclei
files.cases.samples.portions.slides.section_location
files.cases.samples.portions.slides.slide_id
files.cases.samples.portions.slides.state
files.cases.samples.portions.slides.submitter_id
files.cases.samples.portions.slides.updated_datetime
files.cases.samples.portions.slides.annotations.annotation_id
files.cases.samples.portions.slides.annotations.case_id
files.cases.samples.portions.slides.annotations.case_submitter_id
files.cases.samples.portions.slides.annotations.category
files.cases.samples.portions.slides.annotations.classification
files.cases.samples.portions.slides.annotations.created_datetime
files.cases.samples.portions.slides.annotations.creator
files.cases.samples.portions.slides.annotations.entity_id
files.cases.samples.portions.slides.annotations.entity_submitter_id
files.cases.samples.portions.slides.annotations.entity_type
files.cases.samples.portions.slides.annotations.legacy_created_datetime
files.cases.samples.portions.slides.annotations.legacy_updated_datetime
files.cases.samples.portions.slides.annotations.notes
files.cases.samples.portions.slides.annotations.state
files.cases.samples.portions.slides.annotations.status
files.cases.samples.portions.slides.annotations.submitter_id
files.cases.samples.portions.slides.annotations.updated_datetime
files.cases.summary.file_count
files.cases.summary.file_size
files.cases.summary.data_categories.data_category
files.cases.summary.data_categories.file_count
files.cases.summary.experimental_strategies.experimental_strategy
files.cases.summary.experimental_strategies.file_count
files.cases.tissue_source_site.bcr_id
files.cases.tissue_source_site.code
files.cases.tissue_source_site.name
files.cases.tissue_source_site.project
files.cases.tissue_source_site.tissue_source_site_id
files.center.center_id
files.center.center_type
files.center.code
files.center.name
files.center.namespace
files.center.short_name
files.downstream_analyses.analysis_id
files.downstream_analyses.analysis_type
files.downstream_analyses.created_datetime
files.downstream_analyses.state
files.downstream_analyses.submitter_id
files.downstream_analyses.updated_datetime
files.downstream_analyses.workflow_end_datetime
files.downstream_analyses.workflow_link
files.downstream_analyses.workflow_start_datetime
files.downstream_analyses.workflow_type
files.downstream_analyses.workflow_version
files.downstream_analyses.output_files.access
files.downstream_analyses.output_files.created_datetime
files.downstream_analyses.output_files.data_category
files.downstream_analyses.output_files.data_format
files.downstream_analyses.output_files.data_type
files.downstream_analyses.output_files.error_type
files.downstream_analyses.output_files.experimental_strategy
files.downstream_analyses.output_files.file_id
files.downstream_analyses.output_files.file_name
files.downstream_analyses.output_files.file_size
files.downstream_analyses.output_files.file_state
files.downstream_analyses.output_files.md5sum
files.downstream_analyses.output_files.platform
files.downstream_analyses.output_files.revision
files.downstream_analyses.output_files.state
files.downstream_analyses.output_files.state_comment
files.downstream_analyses.output_files.submitter_id
files.downstream_analyses.output_files.updated_datetime
files.index_files.access
files.index_files.created_datetime
files.index_files.data_category
files.index_files.data_format
files.index_files.data_type
files.index_files.error_type
files.index_files.experimental_strategy
files.index_files.file_id
files.index_files.file_name
files.index_files.file_size
files.index_files.file_state
files.index_files.md5sum
files.index_files.platform
files.index_files.revision
files.index_files.state
files.index_files.state_comment
files.index_files.submitter_id
files.index_files.updated_datetime
files.metadata_files.access
files.metadata_files.created_datetime
files.metadata_files.data_category
files.metadata_files.data_format
files.metadata_files.data_type
files.metadata_files.error_type
files.metadata_files.file_id
files.metadata_files.file_name
files.metadata_files.file_size
files.metadata_files.file_state
files.metadata_files.md5sum
files.metadata_files.state
files.metadata_files.state_comment
files.metadata_files.submitter_id
files.metadata_files.type
files.metadata_files.updated_datetime
follow_ups.adverse_event
follow_ups.adverse_event_grade
follow_ups.aids_risk_factors
follow_ups.barretts_esophagus_goblet_cells_present
follow_ups.bmi
follow_ups.body_surface_area
follow_ups.cause_of_response
follow_ups.cd4_count
follow_ups.cdc_hiv_risk_factors
follow_ups.comorbidities
follow_ups.comorbidity
follow_ups.comorbidity_method_of_diagnosis
follow_ups.created_datetime
follow_ups.days_to_adverse_event
follow_ups.days_to_comorbidity
follow_ups.days_to_first_event
follow_ups.days_to_follow_up
follow_ups.days_to_imaging
follow_ups.days_to_progression
follow_ups.days_to_progression_free
follow_ups.days_to_recurrence
follow_ups.days_to_risk_factor
follow_ups.diabetes_treatment_type
follow_ups.discontiguous_lesion_count
follow_ups.disease_response
follow_ups.dlco_ref_predictive_percent
follow_ups.ecog_performance_status
follow_ups.evidence_of_progression_type
follow_ups.evidence_of_recurrence_type
follow_ups.eye_color
follow_ups.fev1_fvc_post_bronch_percent
follow_ups.fev1_fvc_pre_bronch_percent
follow_ups.fev1_ref_post_bronch_percent
follow_ups.fev1_ref_pre_bronch_percent
follow_ups.first_event
follow_ups.follow_up_id
follow_ups.haart_treatment_indicator
follow_ups.height
follow_ups.hepatitis_sustained_virological_response
follow_ups.history_of_tumor
follow_ups.history_of_tumor_type
follow_ups.hiv_viral_load
follow_ups.hormonal_contraceptive_type
follow_ups.hormonal_contraceptive_use
follow_ups.hormone_replacement_therapy_type
follow_ups.hpv_positive_type
follow_ups.hysterectomy_margins_involved
follow_ups.hysterectomy_type
follow_ups.imaging_anatomic_site
follow_ups.imaging_findings
follow_ups.imaging_result
follow_ups.imaging_suv
follow_ups.imaging_suv_max
follow_ups.imaging_type
follow_ups.immunosuppressive_treatment_type
follow_ups.karnofsky_performance_status
follow_ups.menopause_status
follow_ups.molecular_tests.aa_change
follow_ups.molecular_tests.aneuploidy
follow_ups.molecular_tests.antigen
follow_ups.molecular_tests.biospecimen_type
follow_ups.molecular_tests.biospecimen_volume
follow_ups.molecular_tests.blood_test_normal_range_lower
follow_ups.molecular_tests.blood_test_normal_range_upper
follow_ups.molecular_tests.cell_count
follow_ups.molecular_tests.chromosomal_translocation
follow_ups.molecular_tests.chromosome
follow_ups.molecular_tests.chromosome_arm
follow_ups.molecular_tests.clonality
follow_ups.molecular_tests.copy_number
follow_ups.molecular_tests.created_datetime
follow_ups.molecular_tests.cytoband
follow_ups.molecular_tests.days_to_test
follow_ups.molecular_tests.exon
follow_ups.molecular_tests.gene_symbol
follow_ups.molecular_tests.histone_family
follow_ups.molecular_tests.histone_variant
follow_ups.molecular_tests.hpv_strain
follow_ups.molecular_tests.intron
follow_ups.molecular_tests.laboratory_test
follow_ups.molecular_tests.loci_abnormal_count
follow_ups.molecular_tests.loci_count
follow_ups.molecular_tests.locus
follow_ups.molecular_tests.mismatch_repair_mutation
follow_ups.molecular_tests.mitotic_count
follow_ups.molecular_tests.mitotic_total_area
follow_ups.molecular_tests.molecular_analysis_method
follow_ups.molecular_tests.molecular_consequence
follow_ups.molecular_tests.molecular_test_id
follow_ups.molecular_tests.mutation_codon
follow_ups.molecular_tests.pathogenicity
follow_ups.molecular_tests.ploidy
follow_ups.molecular_tests.second_exon
follow_ups.molecular_tests.second_gene_symbol
follow_ups.molecular_tests.specialized_molecular_test
follow_ups.molecular_tests.staining_intensity_scale
follow_ups.molecular_tests.staining_intensity_value
follow_ups.molecular_tests.state
follow_ups.molecular_tests.submitter_id
follow_ups.molecular_tests.test_analyte_type
follow_ups.molecular_tests.test_result
follow_ups.molecular_tests.test_units
follow_ups.molecular_tests.test_value
follow_ups.molecular_tests.test_value_range
follow_ups.molecular_tests.timepoint_category
follow_ups.molecular_tests.transcript
follow_ups.molecular_tests.updated_datetime
follow_ups.molecular_tests.variant_origin
follow_ups.molecular_tests.variant_type
follow_ups.molecular_tests.zygosity
follow_ups.nadir_cd4_count
follow_ups.other_clinical_attributes.aids_risk_factors
follow_ups.other_clinical_attributes.bmi
follow_ups.other_clinical_attributes.body_surface_area
follow_ups.other_clinical_attributes.cd4_count
follow_ups.other_clinical_attributes.cdc_hiv_risk_factors
follow_ups.other_clinical_attributes.comorbidities
follow_ups.other_clinical_attributes.comorbidity_method_of_diagnosis
follow_ups.other_clinical_attributes.created_datetime
follow_ups.other_clinical_attributes.days_to_comorbidity
follow_ups.other_clinical_attributes.days_to_risk_factor
follow_ups.other_clinical_attributes.diabetes_treatment_type
follow_ups.other_clinical_attributes.dlco_ref_predictive_percent
follow_ups.other_clinical_attributes.exercise_frequency_weekly
follow_ups.other_clinical_attributes.eye_color
follow_ups.other_clinical_attributes.fev1_fvc_post_bronch_percent
follow_ups.other_clinical_attributes.fev1_fvc_pre_bronch_percent
follow_ups.other_clinical_attributes.fev1_ref_post_bronch_percent
follow_ups.other_clinical_attributes.fev1_ref_pre_bronch_percent
follow_ups.other_clinical_attributes.haart_treatment_indicator
follow_ups.other_clinical_attributes.height
follow_ups.other_clinical_attributes.hepatitis_sustained_virological_response
follow_ups.other_clinical_attributes.hiv_viral_load
follow_ups.other_clinical_attributes.hormonal_contraceptive_type
follow_ups.other_clinical_attributes.hormonal_contraceptive_use
follow_ups.other_clinical_attributes.hormonal_replacement_therapy_status
follow_ups.other_clinical_attributes.hormone_replacement_therapy_type
follow_ups.other_clinical_attributes.hysterectomy_margins_involved
follow_ups.other_clinical_attributes.hysterectomy_type
follow_ups.other_clinical_attributes.immunosuppressive_treatment_type
follow_ups.other_clinical_attributes.menopause_status
follow_ups.other_clinical_attributes.myasthenia_gravis_classification
follow_ups.other_clinical_attributes.nadir_cd4_count
follow_ups.other_clinical_attributes.nononcologic_therapeutic_agents
follow_ups.other_clinical_attributes.number_of_pregnancies
follow_ups.other_clinical_attributes.other_clinical_attribute_id
follow_ups.other_clinical_attributes.oxygen_use_indicator
follow_ups.other_clinical_attributes.oxygen_use_type
follow_ups.other_clinical_attributes.pancreatitis_onset_year
follow_ups.other_clinical_attributes.pregnancy_count
follow_ups.other_clinical_attributes.pregnancy_outcome
follow_ups.other_clinical_attributes.pregnant_at_diagnosis
follow_ups.other_clinical_attributes.premature_at_birth
follow_ups.other_clinical_attributes.reflux_treatment_type
follow_ups.other_clinical_attributes.risk_factor_method_of_diagnosis
follow_ups.other_clinical_attributes.risk_factor_treatment
follow_ups.other_clinical_attributes.risk_factors
follow_ups.other_clinical_attributes.state
follow_ups.other_clinical_attributes.submitter_id
follow_ups.other_clinical_attributes.timepoint_category
follow_ups.other_clinical_attributes.treatment_frequency
follow_ups.other_clinical_attributes.undescended_testis_corrected
follow_ups.other_clinical_attributes.undescended_testis_corrected_age
follow_ups.other_clinical_attributes.undescended_testis_corrected_laterality
follow_ups.other_clinical_attributes.undescended_testis_corrected_method
follow_ups.other_clinical_attributes.undescended_testis_history
follow_ups.other_clinical_attributes.undescended_testis_history_laterality
follow_ups.other_clinical_attributes.updated_datetime
follow_ups.other_clinical_attributes.viral_hepatitis_serologies
follow_ups.other_clinical_attributes.viral_hepatitis_serology_tests
follow_ups.other_clinical_attributes.weeks_gestation_at_birth
follow_ups.other_clinical_attributes.weight
follow_ups.pancreatitis_onset_year
follow_ups.peritoneal_washing_results
follow_ups.pregnancy_count
follow_ups.pregnancy_outcome
follow_ups.procedures_performed
follow_ups.progression_or_recurrence
follow_ups.progression_or_recurrence_anatomic_site
follow_ups.progression_or_recurrence_type
follow_ups.recist_targeted_regions_number
follow_ups.recist_targeted_regions_sum
follow_ups.reflux_treatment_type
follow_ups.risk_factor
follow_ups.risk_factor_method_of_diagnosis
follow_ups.risk_factor_treatment
follow_ups.risk_factors
follow_ups.scan_tracer_used
follow_ups.state
follow_ups.submitter_id
follow_ups.timepoint_category
follow_ups.treatment_emergent_adverse_event
follow_ups.undescended_testis_corrected
follow_ups.undescended_testis_corrected_age
follow_ups.undescended_testis_corrected_laterality
follow_ups.undescended_testis_corrected_method
follow_ups.undescended_testis_history
follow_ups.undescended_testis_history_laterality
follow_ups.updated_datetime
follow_ups.viral_hepatitis_serologies
follow_ups.weight
follow_ups.year_of_follow_up
project.dbgap_accession_number
project.disease_type
project.name
project.primary_site
project.project_id
project.released
project.state
project.program.dbgap_accession_number
project.program.name
project.program.program_id
samples.composition
samples.created_datetime
samples.current_weight
samples.days_to_collection
samples.days_to_sample_procurement
samples.freezing_method
samples.initial_weight
samples.intermediate_dimension
samples.is_ffpe
samples.longest_dimension
samples.oct_embedded
samples.pathology_report_uuid
samples.preservation_method
samples.sample_id
samples.sample_type
samples.sample_type_id
samples.shortest_dimension
samples.state
samples.submitter_id
samples.time_between_clamping_and_freezing
samples.time_between_excision_and_freezing
samples.tissue_type
samples.tumor_code
samples.tumor_code_id
samples.tumor_descriptor
samples.updated_datetime
samples.annotations.annotation_id
samples.annotations.case_id
samples.annotations.case_submitter_id
samples.annotations.category
samples.annotations.classification
samples.annotations.created_datetime
samples.annotations.creator
samples.annotations.entity_id
samples.annotations.entity_submitter_id
samples.annotations.entity_type
samples.annotations.legacy_creat
samples.annotations.legacy_updated_datetime
samples.annotations.notes
samples.annotations.state
samples.annotations.status
samples.annotations.submitter_id
samples.annotations.updated_datetime
samples.portions.created_datetime
samples.portions.creation_datetime
samples.portions.is_ffpe
samples.portions.portion_id
samples.portions.portion_number
samples.portions.state
samples.portions.submitter_id
samples.portions.updated_datetime
samples.portions.weight
samples.portions.analytes.a260_a280_ratio
samples.portions.analytes.amount
samples.portions.analytes.analyte_id
samples.portions.analytes.analyte_type
samples.portions.analytes.analyte_type_id
samples.portions.analytes.concentration
samples.portions.analytes.created_datetime
samples.portions.analytes.spectrophotometer_method
samples.portions.analytes.state
samples.portions.analytes.submitter_id
samples.portions.analytes.updated_datetime
samples.portions.analytes.well_number
samples.portions.analytes.aliquots.aliquot_id
samples.portions.analytes.aliquots.amount
samples.portions.analytes.aliquots.analyte_type
samples.portions.analytes.aliquots.analyte_type_id
samples.portions.analytes.aliquots.concentration
samples.portions.analytes.aliquots.created_datetime
samples.portions.analytes.aliquots.source_center
samples.portions.analytes.aliquots.state
samples.portions.analytes.aliquots.submitter_id
samples.portions.analytes.aliquots.updated_datetime
samples.portions.analytes.aliquots.annotations.annotation_id
samples.portions.analytes.aliquots.annotations.case_id
samples.portions.analytes.aliquots.annotations.case_submitter_id
samples.portions.analytes.aliquots.annotations.category
samples.portions.analytes.aliquots.annotations.classification
samples.portions.analytes.aliquots.annotations.created_datetime
samples.portions.analytes.aliquots.annotations.creator
samples.portions.analytes.aliquots.annotations.entity_id
samples.portions.analytes.aliquots.annotations.entity_submitter_id
samples.portions.analytes.aliquots.annotations.entity_type
samples.portions.analytes.aliquots.annotations.legacy_created_datetime
samples.portions.analytes.aliquots.annotations.legacy_updated_datetime
samples.portions.analytes.aliquots.annotations.notes
samples.portions.analytes.aliquots.annotations.state
samples.portions.analytes.aliquots.annotations.status
samples.portions.analytes.aliquots.annotations.submitter_id
samples.portions.analytes.aliquots.annotations.updated_datetime
samples.portions.analytes.aliquots.center.center_id
samples.portions.analytes.aliquots.center.center_type
samples.portions.analytes.aliquots.center.code
samples.portions.analytes.aliquots.center.name
samples.portions.analytes.aliquots.center.namespace
samples.portions.analytes.aliquots.center.short_name
samples.portions.analytes.annotations.annotation_id
samples.portions.analytes.annotations.case_id
samples.portions.analytes.annotations.case_submitter_id
samples.portions.analytes.annotations.category
samples.portions.analytes.annotations.classification
samples.portions.analytes.annotations.created_datetime
samples.portions.analytes.annotations.creator
samples.portions.analytes.annotations.entity_id
samples.portions.analytes.annotations.entity_submitter_id
samples.portions.analytes.annotations.entity_type
samples.portions.analytes.annotations.legacy_created_datetime
samples.portions.analytes.annotations.legacy_updated_datetime
samples.portions.analytes.annotations.notes
samples.portions.analytes.annotations.state
samples.portions.analytes.annotations.status
samples.portions.analytes.annotations.submitter_id
samples.portions.analytes.annotations.updated_datetime
samples.portions.annotations.annotation_id
samples.portions.annotations.case_id
samples.portions.annotations.case_submitter_id
samples.portions.annotations.category
samples.portions.annotations.classification
samples.portions.annotations.created_datetime
samples.portions.annotations.creator
samples.portions.annotations.entity_id
samples.portions.annotations.entity_submitter_id
samples.portions.annotations.entity_type
samples.portions.annotations.legacy_created_datetime
samples.portions.annotations.legacy_updated_datetime
samples.portions.annotations.notes
samples.portions.annotations.state
samples.portions.annotations.status
samples.portions.annotations.submitter_id
samples.portions.annotations.updated_datetime
samples.portions.center.center_id
samples.portions.center.center_type
samples.portions.center.code
samples.portions.center.name
samples.portions.center.namespace
samples.portions.center.short_name
samples.portions.slides.created_datetime
samples.portions.slides.number_proliferating_cells
samples.portions.slides.percent_eosinophil_infiltration
samples.portions.slides.percent_granulocyte_infiltration
samples.portions.slides.percent_inflam_infiltration
samples.portions.slides.percent_lymphocyte_infiltration
samples.portions.slides.percent_monocyte_infiltration
samples.portions.slides.percent_necrosis
samples.portions.slides.percent_neutrophil_infiltration
samples.portions.slides.percent_normal_cells
samples.portions.slides.percent_stromal_cells
samples.portions.slides.percent_tumor_cells
samples.portions.slides.percent_tumor_nuclei
samples.portions.slides.section_location
samples.portions.slides.slide_id
samples.portions.slides.state
samples.portions.slides.submitter_id
samples.portions.slides.updated_datetime
samples.portions.slides.annotations.annotation_id
samples.portions.slides.annotations.case_id
samples.portions.slides.annotations.case_submitter_id
samples.portions.slides.annotations.category
samples.portions.slides.annotations.classification
samples.portions.slides.annotations.created_datetime
samples.portions.slides.annotations.creator
samples.portions.slides.annotations.entity_id
samples.portions.slides.annotations.entity_submitter_id
samples.portions.slides.annotations.entity_type
samples.portions.slides.annotations.legacy_created_datetime
samples.portions.slides.annotations.legacy_updated_datetime
samples.portions.slides.annotations.notes
samples.portions.slides.annotations.state
samples.portions.slides.annotations.status
samples.portions.slides.annotations.submitter_id
samples.portions.slides.annotations.updated_datetime
summary.file_count
summary.file_size
summary.data_categories.data_category
summary.data_categories.file_count
summary.experimental_strategies.experimental_strategy
summary.experimental_strategies.file_count
tissue_source_site.bcr_id
tissue_source_site.code
tissue_source_site.name
tissue_source_site.project
tissue_source_site.tissue_source_site_id

File Fields

Field Name
access
acl
created_datetime
data_category
data_format
data_type
error_type
experimental_strategy
file_id
file_name
file_size
file_state
md5sum
origin
platform
revision
state
state_comment
submitter_id
tags
type
updated_datetime
analysis.analysis_id
analysis.analysis_type
analysis.created_datetime
analysis.state
analysis.submitter_id
analysis.updated_datetime
analysis.workflow_end_datetime
analysis.workflow_link
analysis.workflow_start_datetime
analysis.workflow_type
analysis.workflow_version
analysis.input_files.access
analysis.input_files.created_datetime
analysis.input_files.data_category
analysis.input_files.data_format
analysis.input_files.data_type
analysis.input_files.error_type
analysis.input_files.experimental_strategy
analysis.input_files.file_id
analysis.input_files.file_name
analysis.input_files.file_size
analysis.input_files.file_state
analysis.input_files.md5sum
analysis.input_files.platform
analysis.input_files.revision
analysis.input_files.state
analysis.input_files.state_comment
analysis.input_files.submitter_id
analysis.input_files.updated_datetime
analysis.metadata.read_groups.adapter_name
analysis.metadata.read_groups.adapter_sequence
analysis.metadata.read_groups.base_caller_name
analysis.metadata.read_groups.base_caller_version
analysis.metadata.read_groups.created_datetime
analysis.metadata.read_groups.experiment_name
analysis.metadata.read_groups.flow_cell_barcode
analysis.metadata.read_groups.includes_spike_ins
analysis.metadata.read_groups.instrument_model
analysis.metadata.read_groups.is_paired_end
analysis.metadata.read_groups.library_name
analysis.metadata.read_groups.library_preparation_kit_catalog_number
analysis.metadata.read_groups.library_preparation_kit_name
analysis.metadata.read_groups.library_preparation_kit_vendor
analysis.metadata.read_groups.library_preparation_kit_version
analysis.metadata.read_groups.library_selection
analysis.metadata.read_groups.library_strand
analysis.metadata.read_groups.library_strategy
analysis.metadata.read_groups.platform
analysis.metadata.read_groups.read_group_id
analysis.metadata.read_groups.read_group_name
analysis.metadata.read_groups.read_length
analysis.metadata.read_groups.RIN
analysis.metadata.read_groups.sequencing_center
analysis.metadata.read_groups.sequencing_date
analysis.metadata.read_groups.size_selection_range
analysis.metadata.read_groups.spike_ins_concentration
analysis.metadata.read_groups.spike_ins_fasta
analysis.metadata.read_groups.state
analysis.metadata.read_groups.submitter_id
analysis.metadata.read_groups.target_capture_kit_catalog_number
analysis.metadata.read_groups.target_capture_kit_name
analysis.metadata.read_groups.target_capture_kit_target_region
analysis.metadata.read_groups.target_capture_kit_vendor
analysis.metadata.read_groups.target_capture_kit_version
analysis.metadata.read_groups.to_trim_adapter_sequence
analysis.metadata.read_groups.updated_datetime
analysis.metadata.read_groups.read_group_qcs.adapter_content
analysis.metadata.read_groups.read_group_qcs.basic_statistics
analysis.metadata.read_groups.read_group_qcs.created_datetime
analysis.metadata.read_groups.read_group_qcs.encoding
analysis.metadata.read_groups.read_group_qcs.fastq_name
analysis.metadata.read_groups.read_group_qcs.kmer_content
analysis.metadata.read_groups.read_group_qcs.overrepresented_sequences
analysis.metadata.read_groups.read_group_qcs.per_base_n_content
analysis.metadata.read_groups.read_group_qcs.per_base_sequence_content
analysis.metadata.read_groups.read_group_qcs.per_base_sequence_quality
analysis.metadata.read_groups.read_group_qcs.per_sequence_gc_content
analysis.metadata.read_groups.read_group_qcs.per_sequence_quality_score
analysis.metadata.read_groups.read_group_qcs.per_tile_sequence_quality
analysis.metadata.read_groups.read_group_qcs.percent_gc_content
analysis.metadata.read_groups.read_group_qcs.read_group_qc_id
analysis.metadata.read_groups.read_group_qcs.sequence_duplication_levels
analysis.metadata.read_groups.read_group_qcs.sequence_length_distribution
analysis.metadata.read_groups.read_group_qcs.state
analysis.metadata.read_groups.read_group_qcs.submitter_id
analysis.metadata.read_groups.read_group_qcs.total_sequences
analysis.metadata.read_groups.read_group_qcs.updated_datetime
analysis.metadata.read_groups.read_group_qcs.workflow_end_datetime
analysis.metadata.read_groups.read_group_qcs.workflow_link
analysis.metadata.read_groups.read_group_qcs.workflow_start_datetime
analysis.metadata.read_groups.read_group_qcs.workflow_type
analysis.metadata.read_groups.read_group_qcs.workflow_version
annotations.annotation_id
annotations.case_id
annotations.case_submitter_id
annotations.category
annotations.classification
annotations.created_datetime
annotations.creator
annotations.entity_id
annotations.entity_submitter_id
annotations.entity_type
annotations.legacy_created_datetime
annotations.legacy_updated_datetime
annotations.notes
annotations.state
annotations.status
annotations.submitter_id
annotations.updated_datetime
archive.archive_id
archive.created_datetime
archive.data_category
archive.data_format
archive.data_type
archive.error_type
archive.file_name
archive.file_size
archive.file_state
archive.md5sum
archive.revision
archive.state
archive.state_comment
archive.submitter_id
archive.updated_datetime
associated_entities.case_id
associated_entities.entity_id
associated_entities.entity_submitter_id
associated_entities.entity_type
cases.aliquot_ids
cases.analyte_ids
cases.case_id
cases.created_datetime
cases.days_to_index
cases.portion_ids
cases.sample_ids
cases.slide_ids
cases.state
cases.submitter_aliquot_ids
cases.submitter_analyte_ids
cases.submitter_id
cases.submitter_portion_ids
cases.submitter_sample_ids
cases.submitter_slide_ids
cases.updated_datetime
cases.annotations.annotation_id
cases.annotations.case_id
cases.annotations.case_submitter_id
cases.annotations.category
cases.annotations.classification
cases.annotations.created_datetime
cases.annotations.creator
cases.annotations.entity_id
cases.annotations.entity_submitter_id
cases.annotations.entity_type
cases.annotations.legacy_created_datetime
cases.annotations.legacy_updated_datetime
cases.annotations.notes
cases.annotations.state
cases.annotations.status
cases.annotations.submitter_id
cases.annotations.updated_datetime
cases.demographic.created_datetime
cases.demographic.demographic_id
cases.demographic.ethnicity
cases.demographic.gender
cases.demographic.race
cases.demographic.state
cases.demographic.submitter_id
cases.demographic.updated_datetime
cases.demographic.year_of_birth
cases.demographic.year_of_death
cases.diagnoses.age_at_diagnosis
cases.diagnoses.classification_of_tumor
cases.diagnoses.created_datetime
cases.diagnoses.days_to_birth
cases.diagnoses.days_to_death
cases.diagnoses.days_to_last_follow_up
cases.diagnoses.days_to_last_known_disease_status
cases.diagnoses.days_to_recurrence
cases.diagnoses.diagnosis_id
cases.diagnoses.last_known_disease_status
cases.diagnoses.morphology
cases.diagnoses.primary_diagnosis
cases.diagnoses.prior_malignancy
cases.diagnoses.progression_or_recurrence
cases.diagnoses.site_of_resection_or_biopsy
cases.diagnoses.state
cases.diagnoses.submitter_id
cases.diagnoses.tissue_or_organ_of_origin
cases.diagnoses.tumor_grade
cases.diagnoses.tumor_stage
cases.diagnoses.updated_datetime
cases.diagnoses.vital_status
cases.diagnoses.treatments.created_datetime
cases.diagnoses.treatments.days_to_treatment
cases.diagnoses.treatments.state
cases.diagnoses.treatments.submitter_id
cases.diagnoses.treatments.therapeutic_agents
cases.diagnoses.treatments.treatment_id
cases.diagnoses.treatments.treatment_intent_type
cases.diagnoses.treatments.treatment_or_therapy
cases.diagnoses.treatments.updated_datetime
cases.exposures.alcohol_history
cases.exposures.alcohol_intensity
cases.exposures.bmi
cases.exposures.cigarettes_per_day
cases.exposures.created_datetime
cases.exposures.exposure_id
cases.exposures.height
cases.exposures.state
cases.exposures.submitter_id
cases.exposures.updated_datetime
cases.exposures.weight
cases.exposures.years_smoked
cases.family_histories.created_datetime
cases.family_histories.family_history_id
cases.family_histories.relationship_age_at_diagnosis
cases.family_histories.relationship_gender
cases.family_histories.relationship_primary_diagnosis
cases.family_histories.relationship_type
cases.family_histories.relative_with_cancer_history
cases.family_histories.state
cases.family_histories.submitter_id
cases.family_histories.updated_datetime
cases.files.created_datetime
cases.files.error_type
cases.files.file_id
cases.files.file_name
cases.files.file_size
cases.files.file_state
cases.files.md5sum
cases.files.state
cases.files.state_comment
cases.files.submitter_id
cases.files.updated_datetime
cases.follow_ups.adverse_event
cases.follow_ups.adverse_event_grade
cases.follow_ups.aids_risk_factors
cases.follow_ups.barretts_esophagus_goblet_cells_present
cases.follow_ups.bmi
cases.follow_ups.body_surface_area
cases.follow_ups.cause_of_response
cases.follow_ups.cd4_count
cases.follow_ups.cdc_hiv_risk_factors
cases.follow_ups.comorbidities
cases.follow_ups.comorbidity
cases.follow_ups.comorbidity_method_of_diagnosis
cases.follow_ups.created_datetime
cases.follow_ups.days_to_adverse_event
cases.follow_ups.days_to_comorbidity
cases.follow_ups.days_to_first_event
cases.follow_ups.days_to_follow_up
cases.follow_ups.days_to_imaging
cases.follow_ups.days_to_progression
cases.follow_ups.days_to_progression_free
cases.follow_ups.days_to_recurrence
cases.follow_ups.days_to_risk_factor
cases.follow_ups.diabetes_treatment_type
cases.follow_ups.discontiguous_lesion_count
cases.follow_ups.disease_response
cases.follow_ups.dlco_ref_predictive_percent
cases.follow_ups.ecog_performance_status
cases.follow_ups.evidence_of_progression_type
cases.follow_ups.evidence_of_recurrence_type
cases.follow_ups.eye_color
cases.follow_ups.fev1_fvc_post_bronch_percent
cases.follow_ups.fev1_fvc_pre_bronch_percent
cases.follow_ups.fev1_ref_post_bronch_percent
cases.follow_ups.fev1_ref_pre_bronch_percent
cases.follow_ups.first_event
cases.follow_ups.follow_up_id
cases.follow_ups.haart_treatment_indicator
cases.follow_ups.height
cases.follow_ups.hepatitis_sustained_virological_response
cases.follow_ups.history_of_tumor
cases.follow_ups.history_of_tumor_type
cases.follow_ups.hiv_viral_load
cases.follow_ups.hormonal_contraceptive_type
cases.follow_ups.hormonal_contraceptive_use
cases.follow_ups.hormone_replacement_therapy_type
cases.follow_ups.hpv_positive_type
cases.follow_ups.hysterectomy_margins_involved
cases.follow_ups.hysterectomy_type
cases.follow_ups.imaging_anatomic_site
cases.follow_ups.imaging_findings
cases.follow_ups.imaging_result
cases.follow_ups.imaging_suv
cases.follow_ups.imaging_suv_max
cases.follow_ups.imaging_type
cases.follow_ups.immunosuppressive_treatment_type
cases.follow_ups.karnofsky_performance_status
cases.follow_ups.menopause_status
cases.follow_ups.molecular_tests.aa_change
cases.follow_ups.molecular_tests.aneuploidy
cases.follow_ups.molecular_tests.antigen
cases.follow_ups.molecular_tests.biospecimen_type
cases.follow_ups.molecular_tests.biospecimen_volume
cases.follow_ups.molecular_tests.blood_test_normal_range_lower
cases.follow_ups.molecular_tests.blood_test_normal_range_upper
cases.follow_ups.molecular_tests.cell_count
cases.follow_ups.molecular_tests.chromosomal_translocation
cases.follow_ups.molecular_tests.chromosome
cases.follow_ups.molecular_tests.chromosome_arm
cases.follow_ups.molecular_tests.clonality
cases.follow_ups.molecular_tests.copy_number
cases.follow_ups.molecular_tests.created_datetime
cases.follow_ups.molecular_tests.cytoband
cases.follow_ups.molecular_tests.days_to_test
cases.follow_ups.molecular_tests.exon
cases.follow_ups.molecular_tests.gene_symbol
cases.follow_ups.molecular_tests.histone_family
cases.follow_ups.molecular_tests.histone_variant
cases.follow_ups.molecular_tests.hpv_strain
cases.follow_ups.molecular_tests.intron
cases.follow_ups.molecular_tests.laboratory_test
cases.follow_ups.molecular_tests.loci_abnormal_count
cases.follow_ups.molecular_tests.loci_count
cases.follow_ups.molecular_tests.locus
cases.follow_ups.molecular_tests.mismatch_repair_mutation
cases.follow_ups.molecular_tests.mitotic_count
cases.follow_ups.molecular_tests.mitotic_total_area
cases.follow_ups.molecular_tests.molecular_analysis_method
cases.follow_ups.molecular_tests.molecular_consequence
cases.follow_ups.molecular_tests.molecular_test_id
cases.follow_ups.molecular_tests.mutation_codon
cases.follow_ups.molecular_tests.pathogenicity
cases.follow_ups.molecular_tests.ploidy
cases.follow_ups.molecular_tests.second_exon
cases.follow_ups.molecular_tests.second_gene_symbol
cases.follow_ups.molecular_tests.specialized_molecular_test
cases.follow_ups.molecular_tests.staining_intensity_scale
cases.follow_ups.molecular_tests.staining_intensity_value
cases.follow_ups.molecular_tests.state
cases.follow_ups.molecular_tests.submitter_id
cases.follow_ups.molecular_tests.test_analyte_type
cases.follow_ups.molecular_tests.test_result
cases.follow_ups.molecular_tests.test_units
cases.follow_ups.molecular_tests.test_value
cases.follow_ups.molecular_tests.test_value_range
cases.follow_ups.molecular_tests.timepoint_category
cases.follow_ups.molecular_tests.transcript
cases.follow_ups.molecular_tests.updated_datetime
cases.follow_ups.molecular_tests.variant_origin
cases.follow_ups.molecular_tests.variant_type
cases.follow_ups.molecular_tests.zygosity
cases.follow_ups.nadir_cd4_count
cases.follow_ups.other_clinical_attributes.aids_risk_factors
cases.follow_ups.other_clinical_attributes.bmi
cases.follow_ups.other_clinical_attributes.body_surface_area
cases.follow_ups.other_clinical_attributes.cd4_count
cases.follow_ups.other_clinical_attributes.cdc_hiv_risk_factors
cases.follow_ups.other_clinical_attributes.comorbidities
cases.follow_ups.other_clinical_attributes.comorbidity_method_of_diagnosis
cases.follow_ups.other_clinical_attributes.created_datetime
cases.follow_ups.other_clinical_attributes.days_to_comorbidity
cases.follow_ups.other_clinical_attributes.days_to_risk_factor
cases.follow_ups.other_clinical_attributes.diabetes_treatment_type
cases.follow_ups.other_clinical_attributes.dlco_ref_predictive_percent
cases.follow_ups.other_clinical_attributes.exercise_frequency_weekly
cases.follow_ups.other_clinical_attributes.eye_color
cases.follow_ups.other_clinical_attributes.fev1_fvc_post_bronch_percent
cases.follow_ups.other_clinical_attributes.fev1_fvc_pre_bronch_percent
cases.follow_ups.other_clinical_attributes.fev1_ref_post_bronch_percent
cases.follow_ups.other_clinical_attributes.fev1_ref_pre_bronch_percent
cases.follow_ups.other_clinical_attributes.haart_treatment_indicator
cases.follow_ups.other_clinical_attributes.height
cases.follow_ups.other_clinical_attributes.hepatitis_sustained_virological_response
cases.follow_ups.other_clinical_attributes.hiv_viral_load
cases.follow_ups.other_clinical_attributes.hormonal_contraceptive_type
cases.follow_ups.other_clinical_attributes.hormonal_contraceptive_use
cases.follow_ups.other_clinical_attributes.hormonal_replacement_therapy_status
cases.follow_ups.other_clinical_attributes.hormone_replacement_therapy_type
cases.follow_ups.other_clinical_attributes.hysterectomy_margins_involved
cases.follow_ups.other_clinical_attributes.hysterectomy_type
cases.follow_ups.other_clinical_attributes.immunosuppressive_treatment_type
cases.follow_ups.other_clinical_attributes.menopause_status
cases.follow_ups.other_clinical_attributes.myasthenia_gravis_classification
cases.follow_ups.other_clinical_attributes.nadir_cd4_count
cases.follow_ups.other_clinical_attributes.nononcologic_therapeutic_agents
cases.follow_ups.other_clinical_attributes.number_of_pregnancies
cases.follow_ups.other_clinical_attributes.other_clinical_attribute_id
cases.follow_ups.other_clinical_attributes.oxygen_use_indicator
cases.follow_ups.other_clinical_attributes.oxygen_use_type
cases.follow_ups.other_clinical_attributes.pancreatitis_onset_year
cases.follow_ups.other_clinical_attributes.pregnancy_count
cases.follow_ups.other_clinical_attributes.pregnancy_outcome
cases.follow_ups.other_clinical_attributes.pregnant_at_diagnosis
cases.follow_ups.other_clinical_attributes.premature_at_birth
cases.follow_ups.other_clinical_attributes.reflux_treatment_type
cases.follow_ups.other_clinical_attributes.risk_factor_method_of_diagnosis
cases.follow_ups.other_clinical_attributes.risk_factor_treatment
cases.follow_ups.other_clinical_attributes.risk_factors
cases.follow_ups.other_clinical_attributes.state
cases.follow_ups.other_clinical_attributes.submitter_id
cases.follow_ups.other_clinical_attributes.timepoint_category
cases.follow_ups.other_clinical_attributes.treatment_frequency
cases.follow_ups.other_clinical_attributes.undescended_testis_corrected
cases.follow_ups.other_clinical_attributes.undescended_testis_corrected_age
cases.follow_ups.other_clinical_attributes.undescended_testis_corrected_laterality
cases.follow_ups.other_clinical_attributes.undescended_testis_corrected_method
cases.follow_ups.other_clinical_attributes.undescended_testis_history
cases.follow_ups.other_clinical_attributes.undescended_testis_history_laterality
cases.follow_ups.other_clinical_attributes.updated_datetime
cases.follow_ups.other_clinical_attributes.viral_hepatitis_serologies
cases.follow_ups.other_clinical_attributes.viral_hepatitis_serology_tests
cases.follow_ups.other_clinical_attributes.weeks_gestation_at_birth
cases.follow_ups.other_clinical_attributes.weight
cases.follow_ups.pancreatitis_onset_year
cases.follow_ups.peritoneal_washing_results
cases.follow_ups.pregnancy_count
cases.follow_ups.pregnancy_outcome
cases.follow_ups.procedures_performed
cases.follow_ups.progression_or_recurrence
cases.follow_ups.progression_or_recurrence_anatomic_site
cases.follow_ups.progression_or_recurrence_type
cases.follow_ups.recist_targeted_regions_number
cases.follow_ups.recist_targeted_regions_sum
cases.follow_ups.reflux_treatment_type
cases.follow_ups.risk_factor
cases.follow_ups.risk_factor_method_of_diagnosis
cases.follow_ups.risk_factor_treatment
cases.follow_ups.risk_factors
cases.follow_ups.scan_tracer_used
cases.follow_ups.state
cases.follow_ups.submitter_id
cases.follow_ups.timepoint_category
cases.follow_ups.treatment_emergent_adverse_event
cases.follow_ups.undescended_testis_corrected
cases.follow_ups.undescended_testis_corrected_age
cases.follow_ups.undescended_testis_corrected_laterality
cases.follow_ups.undescended_testis_corrected_method
cases.follow_ups.undescended_testis_history
cases.follow_ups.undescended_testis_history_laterality
cases.follow_ups.updated_datetime
cases.follow_ups.viral_hepatitis_serologies
cases.follow_ups.weight
cases.follow_ups.year_of_follow_up
cases.project.dbgap_accession_number
cases.project.disease_type
cases.project.name
cases.project.primary_site
cases.project.project_id
cases.project.released
cases.project.state
cases.project.program.dbgap_accession_number
cases.project.program.name
cases.project.program.program_id
cases.samples.composition
cases.samples.created_datetime
cases.samples.current_weight
cases.samples.days_to_collection
cases.samples.days_to_sample_procurement
cases.samples.freezing_method
cases.samples.initial_weight
cases.samples.intermediate_dimension
cases.samples.is_ffpe
cases.samples.longest_dimension
cases.samples.oct_embedded
cases.samples.pathology_report_uuid
cases.samples.preservation_method
cases.samples.sample_id
cases.samples.sample_type
cases.samples.sample_type_id
cases.samples.shortest_dimension
cases.samples.state
cases.samples.submitter_id
cases.samples.time_between_clamping_and_freezing
cases.samples.time_between_excision_and_freezing
cases.samples.tissue_type
cases.samples.tumor_code
cases.samples.tumor_code_id
cases.samples.tumor_descriptor
cases.samples.updated_datetime
cases.samples.annotations.annotation_id
cases.samples.annotations.case_id
cases.samples.annotations.case_submitter_id
cases.samples.annotations.category
cases.samples.annotations.classification
cases.samples.annotations.created_datetime
cases.samples.annotations.creator
cases.samples.annotations.entity_id
cases.samples.annotations.entity_submitter_id
cases.samples.annotations.entity_type
cases.samples.annotations.legacy_created_datetime
cases.samples.annotations.legacy_updated_datetime
cases.samples.annotations.notes
cases.samples.annotations.state
cases.samples.annotations.status
cases.samples.annotations.submitter_id
cases.samples.annotations.updated_datetime
cases.samples.portions.created_datetime
cases.samples.portions.creation_datetime
cases.samples.portions.is_ffpe
cases.samples.portions.portion_id
cases.samples.portions.portion_number
cases.samples.portions.state
cases.samples.portions.submitter_id
cases.samples.portions.updated_datetime
cases.samples.portions.weight
cases.samples.portions.analytes.a260_a280_ratio
cases.samples.portions.analytes.amount
cases.samples.portions.analytes.analyte_id
cases.samples.portions.analytes.analyte_type
cases.samples.portions.analytes.analyte_type_id
cases.samples.portions.analytes.concentration
cases.samples.portions.analytes.created_datetime
cases.samples.portions.analytes.spectrophotometer_method
cases.samples.portions.analytes.state
cases.samples.portions.analytes.submitter_id
cases.samples.portions.analytes.updated_datetime
cases.samples.portions.analytes.well_number
cases.samples.portions.analytes.aliquots.aliquot_id
cases.samples.portions.analytes.aliquots.amount
cases.samples.portions.analytes.aliquots.analyte_type
cases.samples.portions.analytes.aliquots.analyte_type_id
cases.samples.portions.analytes.aliquots.concentration
cases.samples.portions.analytes.aliquots.created_datetime
cases.samples.portions.analytes.aliquots.source_center
cases.samples.portions.analytes.aliquots.state
cases.samples.portions.analytes.aliquots.submitter_id
cases.samples.portions.analytes.aliquots.updated_datetime
cases.samples.portions.analytes.aliquots.annotations.annotation_id
cases.samples.portions.analytes.aliquots.annotations.case_id
cases.samples.portions.analytes.aliquots.annotations.case_submitter_id
cases.samples.portions.analytes.aliquots.annotations.category
cases.samples.portions.analytes.aliquots.annotations.classification
cases.samples.portions.analytes.aliquots.annotations.created_datetime
cases.samples.portions.analytes.aliquots.annotations.creator
cases.samples.portions.analytes.aliquots.annotations.entity_id
cases.samples.portions.analytes.aliquots.annotations.entity_submitter_id
cases.samples.portions.analytes.aliquots.annotations.entity_type
cases.samples.portions.analytes.aliquots.annotations.legacy_created_datetime
cases.samples.portions.analytes.aliquots.annotations.legacy_updated_datetime
cases.samples.portions.analytes.aliquots.annotations.notes
cases.samples.portions.analytes.aliquots.annotations.state
cases.samples.portions.analytes.aliquots.annotations.status
cases.samples.portions.analytes.aliquots.annotations.submitter_id
cases.samples.portions.analytes.aliquots.annotations.updated_datetime
cases.samples.portions.analytes.aliquots.center.center_id
cases.samples.portions.analytes.aliquots.center.center_type
cases.samples.portions.analytes.aliquots.center.code
cases.samples.portions.analytes.aliquots.center.name
cases.samples.portions.analytes.aliquots.center.namespace
cases.samples.portions.analytes.aliquots.center.short_name
cases.samples.portions.analytes.annotations.annotation_id
cases.samples.portions.analytes.annotations.case_id
cases.samples.portions.analytes.annotations.case_submitter_id
cases.samples.portions.analytes.annotations.category
cases.samples.portions.analytes.annotations.classification
cases.samples.portions.analytes.annotations.created_datetime
cases.samples.portions.analytes.annotations.creator
cases.samples.portions.analytes.annotations.entity_id
cases.samples.portions.analytes.annotations.entity_submitter_id
cases.samples.portions.analytes.annotations.entity_type
cases.samples.portions.analytes.annotations.legacy_created_datetime
cases.samples.portions.analytes.annotations.legacy_updated_datetime
cases.samples.portions.analytes.annotations.notes
cases.samples.portions.analytes.annotations.state
cases.samples.portions.analytes.annotations.status
cases.samples.portions.analytes.annotations.submitter_id
cases.samples.portions.analytes.annotations.updated_datetime
cases.samples.portions.annotations.annotation_id
cases.samples.portions.annotations.case_id
cases.samples.portions.annotations.case_submitter_id
cases.samples.portions.annotations.category
cases.samples.portions.annotations.classification
cases.samples.portions.annotations.created_datetime
cases.samples.portions.annotations.creator
cases.samples.portions.annotations.entity_id
cases.samples.portions.annotations.entity_submitter_id
cases.samples.portions.annotations.entity_type
cases.samples.portions.annotations.legacy_created_datetime
cases.samples.portions.annotations.legacy_updated_datetime
cases.samples.portions.annotations.notes
cases.samples.portions.annotations.state
cases.samples.portions.annotations.status
cases.samples.portions.annotations.submitter_id
cases.samples.portions.annotations.updated_datetime
cases.samples.portions.center.center_id
cases.samples.portions.center.center_type
cases.samples.portions.center.code
cases.samples.portions.center.name
cases.samples.portions.center.namespace
cases.samples.portions.center.short_name
cases.samples.portions.slides.created_datetime
cases.samples.portions.slides.number_proliferating_cells
cases.samples.portions.slides.percent_eosinophil_infiltration
cases.samples.portions.slides.percent_granulocyte_infiltration
cases.samples.portions.slides.percent_inflam_infiltration
cases.samples.portions.slides.percent_lymphocyte_infiltration
cases.samples.portions.slides.percent_monocyte_infiltration
cases.samples.portions.slides.percent_necrosis
cases.samples.portions.slides.percent_neutrophil_infiltration
cases.samples.portions.slides.percent_normal_cells
cases.samples.portions.slides.percent_stromal_cells
cases.samples.portions.slides.percent_tumor_cells
cases.samples.portions.slides.percent_tumor_nuclei
cases.samples.portions.slides.section_location
cases.samples.portions.slides.slide_id
cases.samples.portions.slides.state
cases.samples.portions.slides.submitter_id
cases.samples.portions.slides.updated_datetime
cases.samples.portions.slides.annotations.annotation_id
cases.samples.portions.slides.annotations.case_id
cases.samples.portions.slides.annotations.case_submitter_id
cases.samples.portions.slides.annotations.category
cases.samples.portions.slides.annotations.classification
cases.samples.portions.slides.annotations.created_datetime
cases.samples.portions.slides.annotations.creator
cases.samples.portions.slides.annotations.entity_id
cases.samples.portions.slides.annotations.entity_submitter_id
cases.samples.portions.slides.annotations.entity_type
cases.samples.portions.slides.annotations.legacy_created_datetime
cases.samples.portions.slides.annotations.legacy_updated_datetime
cases.samples.portions.slides.annotations.notes
cases.samples.portions.slides.annotations.state
cases.samples.portions.slides.annotations.status
cases.samples.portions.slides.annotations.submitter_id
cases.samples.portions.slides.annotations.updated_datetime
cases.summary.file_count
cases.summary.file_size
cases.summary.data_categories.data_category
cases.summary.data_categories.file_count
cases.summary.experimental_strategies.experimental_strategy
cases.summary.experimental_strategies.file_count
cases.tissue_source_site.bcr_id
cases.tissue_source_site.code
cases.tissue_source_site.name
cases.tissue_source_site.project
cases.tissue_source_site.tissue_source_site_id
center.center_id
center.center_type
center.code
center.name
center.namespace
center.short_name
downstream_analyses.analysis_id
downstream_analyses.analysis_type
downstream_analyses.created_datetime
downstream_analyses.state
downstream_analyses.submitter_id
downstream_analyses.updated_datetime
downstream_analyses.workflow_end_datetime
downstream_analyses.workflow_link
downstream_analyses.workflow_start_datetime
downstream_analyses.workflow_type
downstream_analyses.workflow_version
downstream_analyses.output_files.access
downstream_analyses.output_files.created_datetime
downstream_analyses.output_files.data_category
downstream_analyses.output_files.data_format
downstream_analyses.output_files.data_type
downstream_analyses.output_files.error_type
downstream_analyses.output_files.experimental_strategy
downstream_analyses.output_files.file_id
downstream_analyses.output_files.file_name
downstream_analyses.output_files.file_size
downstream_analyses.output_files.file_state
downstream_analyses.output_files.md5sum
downstream_analyses.output_files.platform
downstream_analyses.output_files.revision
downstream_analyses.output_files.state
downstream_analyses.output_files.state_comment
downstream_analyses.output_files.submitter_id
downstream_analyses.output_files.updated_datetime
index_files.access
index_files.created_datetime
index_files.data_category
index_files.data_format
index_files.data_type
index_files.error_type
index_files.experimental_strategy
index_files.file_id
index_files.file_name
index_files.file_size
index_files.file_state
index_files.md5sum
index_files.platform
index_files.revision
index_files.state
index_files.state_comment
index_files.submitter_id
index_files.updated_datetime
metadata_files.access
metadata_files.created_datetime
metadata_files.data_category
metadata_files.data_format
metadata_files.data_type
metadata_files.error_type
metadata_files.file_id
metadata_files.file_name
metadata_files.file_size
metadata_files.file_state
metadata_files.md5sum
metadata_files.state
metadata_files.state_comment
metadata_files.submitter_id
metadata_files.type
metadata_files.updated_datetime

Annotation Fields

Field Name
annotation_id
case_id
case_submitter_id
category
classification
created_datetime
entity_id
entity_submitter_id
entity_type
legacy_created_datetime
legacy_updated_datetime
notes
state
status
submitter_id
updated_datetime
project.code
project.dbgap_accession_number
project.disease_type
project.name
project.primary_site
project.program.dbgap_accession_number
project.program.name
project.program.program_id
project.project_id
project.released
project.state

Field Group Listing by Endpoint

Projects Field Groups

Field Group Name
program
summary
summary.data_categories
summary.experimental_strategies

Cases Field Groups

Field Group Name
annotations
demographic
diagnoses
diagnoses.treatments
exposures
family_histories
files
files.analysis
files.analysis.input_files
files.analysis.metadata
files.analysis.metadata.read_groups
files.analysis.metadata.read_groups.read_group_qcs
files.archive
files.cases
files.cases.annotations
files.cases.demographic
files.cases.diagnoses
files.cases.diagnoses.treatments
files.cases.exposures
files.cases.family_histories
files.cases.files
files.cases.project
files.cases.project.program
files.cases.samples
files.cases.samples.annotations
files.cases.samples.portions
files.cases.samples.portions.analytes
files.cases.samples.portions.analytes.aliquots
files.cases.samples.portions.analytes.aliquots.annotations
files.cases.samples.portions.analytes.aliquots.center
files.cases.samples.portions.analytes.annotations
files.cases.samples.portions.annotations
files.cases.samples.portions.center
files.cases.samples.portions.slides
files.cases.samples.portions.slides.annotations
files.cases.summary
files.cases.summary.data_categories
files.cases.summary.experimental_strategies
files.cases.tissue_source_site
files.center
files.downstream_analyses
files.downstream_analyses.output_files
files.index_files
files.metadata_files
project
project.program
samples
samples.annotations
samples.portions
samples.portions.analytes
samples.portions.analytes.aliquots
samples.portions.analytes.aliquots.annotations
samples.portions.analytes.aliquots.center
samples.portions.analytes.annotations
samples.portions.annotations
samples.portions.center
samples.portions.slides
samples.portions.slides.annotations
summary
summary.data_categories
summary.experimental_strategies
tissue_source_site

Files Field Groups

Field Group Name
analysis
analysis.input_files
analysis.metadata
analysis.metadata.read_groups
analysis.metadata.read_groups.read_group_qcs
annotations
archive
associated_entities
cases
cases.annotations
cases.demographic
cases.diagnoses
cases.diagnoses.treatments
cases.exposures
cases.family_histories
cases.files
cases.project
cases.project.program
cases.samples
cases.samples.annotations
cases.samples.portions
cases.samples.portions.analytes
cases.samples.portions.analytes.aliquots
cases.samples.portions.analytes.aliquots.annotations
cases.samples.portions.analytes.aliquots.center
cases.samples.portions.analytes.annotations
cases.samples.portions.annotations
cases.samples.portions.center
cases.samples.portions.slides
cases.samples.portions.slides.annotations
cases.summary
cases.summary.data_categories
cases.summary.experimental_strategies
cases.tissue_source_site
center
downstream_analyses
downstream_analyses.output_files
index_files
metadata_files

Annotations Field Groups

Field Group Name
project
project.program

GDC Conventions Supplemental

| Field Group Name | | --- | --- | | File size | Listed in bytes | | Submitter id | String supplied by submitter | | Datetime | Combination of date and time of day in the form [-]CCYY-MM-DDThh:mm:ss |
| Id | GDC supplied UUID ID |