BCGSC miRNA Profiling
Description
BCGSC miRNA Profiling is a miRNA profiling pipeline used in GDC for miRNA quantification analysis.
Overview
BCGSC miRNA Profiling is a part of the miRNA Analysis Pipeline in the GDC miRNA quantification analysis. It uses tumor or normal alignments and generates Isoform Expression Quantification and miRNA Expression Quantification data.
Input
- GDC-aligned BAM - miRNA-Seq
Output
- TSV/TXT (Data Type: Isoform Expression Quantification, miRNA Expression Quantification)
References
External Links
- BCGSC's GitHub
- "Large-scale profiling of microRNAs for The Cancer Genome Atlas" Article
- GDC Data Portal
Categories: Workflow Type