Skip to main content
GDC Document Keyword Search Modal
Search
NIH National Cancer Institute GDC Documentation
Toggle navigation
GDC Apps
Data Portal
API
Documentation
Website
Data Transfer Tool
Data Submission Portal
Home
API
Getting Started
Search and Retrieval
Downloading Files
Data Analysis
BAM Slicing
Submission
Python Examples
GraphQL Examples
System Information
Additional Examples
Appendix A: Available Fields
Appendix B: Key Terms
Appendix C: Format of Submission Queries and Responses
Release Notes
fa-file-text Download PDF /API/PDF/API_UG.pdf
Data Portal
Getting Started
Projects
Exploration
Analysis
Repository
Advanced Search
Cart and File Download
Release Notes
fa-file-text Download PDF /Data_Portal/PDF/Data_Portal_UG.pdf
Data Submission
Before Submitting Data to the GDC Portal
Data Submission Overview
Data Submission Portal
Data Upload Walkthrough
Pre-Release Data Portal
Submission Best Practices
Release Notes
fa-file-text Download PDF /Data_Submission_Portal/PDF/Data_Submission_Portal_UG.pdf
Data Transfer Tool
Getting Started
Preparing for Data Download and Upload
Data Transfer Tool Command Line Documentation
Release Notes - Command Line
Data Transfer Tool UI Documentation
Release Notes - UI
Troubleshooting Guide
fa-file-text Download PDF /Data_Transfer_Tool/PDF/Data_Transfer_Tool_UG.pdf
Data Dictionary
About
Viewer
Search
Release Notes
Data
Introduction
GDC Data Model
Data Security
File Format: MAF
File Format: VCF
Bioinformatics Pipeline: DNA-Seq Analysis
Bioinformatics Pipeline: mRNA Analysis
Bioinformatics Pipeline: miRNA Analysis
Bioinformatics Pipeline: Copy Number Variation Analysis
Bioinformatics Pipeline: Methylation Analysis Pipeline
Bioinformatics Pipeline: Protein Expression
Aligned Reads Summary Metrics
GDC Reference Files
Release Notes
fa-file-text Download PDF /Data/PDF/Data_UG.pdf
Encyclopedia
Quick Search
Getting Started
Search and Retrieval
Downloading Files
Data Analysis
BAM Slicing
Submission
Python Examples
GraphQL Examples
System Information
Additional Examples
Appendix A: Available Fields
Appendix B: Key Terms
Appendix C: Format of Submission Queries and Responses
Release Notes
fa-file-text Download PDF /API/PDF/API_UG.pdf
A PDF version of this document is available
here
.
Previous:
Release Notes
